Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is ntpE

Identifier: 18310623

GI number: 18310623

Start: 1913558

End: 1914154

Strand: Reverse

Name: ntpE

Synonym: CPE1641

Alternate gene names: 18310623

Gene position: 1914154-1913558 (Counterclockwise)

Preceding gene: 18310624

Following gene: 18310622

Centisome position: 63.14

GC content: 26.13

Gene sequence:

>597_bases
ATGTCAAATTTAAATAATTTAACTTCCAAGATTCTAAATGATGCTGAAGAAAAGAAAAAGTATATATTAGCTGACGCTGA
AGCCCAAAAAGATAAAATAATATCTAAGAAAACTAATAGAGCTGAAGCAGATAAAGAAGAAATAATAACTAAAGCTAATA
TAGAAGCAGAAGTTAAAAAGGCAAGAATAATTTCAAATGCTAAATTATCAGTAAGAAATGATATGTTAAGAGCTAAGCAA
GACGTTATATCAAAAGTATTTAACGAAGCTATAGAAAAGTTACAAAATCTTTCTAACGGAGATTATAAATACTATGTTAT
CTCAACTTTAGATTCTTTAGAGTTAGAAGGAACAGAAGTTATTATAATCAATGAAAAAGATAAAGATATATTTAGCAATG
AGTTCTTGGAAGCATTAAATAAAGAACTTGAATCTAAAGGAAAAAAAGGAAGTATTACATTAAATATGGAAGGCAAATTT
AATGGTGGCTTCATATTAGATAGAAATGGAATACAAATAAATAATACCTTTGAAGCTTTAATTAACTCTTTAAGAGGAGA
GTTAGAGTTTGAGGTGAACAAAGTATTATTTGATTAA

Upstream 100 bases:

>100_bases
TGAAACATATGCATTATTAGGATTCGTTATATCATTCTTATTAGTAAATGGTGCAAGCGTAATACAATAATAGTAAGCAA
AGATTGGAGAAGTGAAGGGA

Downstream 100 bases:

>100_bases
GGAGGATGAAGAATGGATTCAATGCAATTTTTGCAATTAATTCCTAGAATCAGAGTATACGAAAAGAAACTCCTTGATAA
AGCTCAAATAGAAAGAATGA

Product: V-type ATPase, E subunit

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit E

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKKARIISNAKLSVRNDMLRAKQ
DVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEVIIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKF
NGGFILDRNGIQINNTFEALINSLRGELEFEVNKVLFD

Sequences:

>Translated_198_residues
MSNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKKARIISNAKLSVRNDMLRAKQ
DVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEVIIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKF
NGGFILDRNGIQINNTFEALINSLRGELEFEVNKVLFD
>Mature_197_residues
SNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKKARIISNAKLSVRNDMLRAKQD
VISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEVIIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKFN
GGFILDRNGIQINNTFEALINSLRGELEFEVNKVLFD

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG1390

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase E subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VATE_CLOP1 (Q0TPW4)

Other databases:

- EMBL:   CP000246
- RefSeq:   YP_696326.1
- ProteinModelPortal:   Q0TPW4
- SMR:   Q0TPW4
- STRING:   Q0TPW4
- GeneID:   4201242
- GenomeReviews:   CP000246_GR
- KEGG:   cpf:CPF_1893
- TIGR:   CPF_1893
- eggNOG:   COG1390
- HOGENOM:   HBG727462
- OMA:   IDDSTLW
- ProtClustDB:   CLSK899372
- BioCyc:   CPER195103:CPF_1893-MONOMER
- HAMAP:   MF_00311
- InterPro:   IPR002842

Pfam domain/function: PF01991 vATP-synt_E

EC number: 3.6.3.14

Molecular weight: Translated: 22424; Mature: 22293

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKK
CCCHHHHHHHHHCCHHHHHHEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH
ARIISNAKLSVRNDMLRAKQDVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCEE
IIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKFNGGFILDRNGIQINNTFEAL
EEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCEEECCHHHHH
INSLRGELEFEVNKVLFD
HHHHCCCEEEEHHEEECC
>Mature Secondary Structure 
SNLNNLTSKILNDAEEKKKYILADAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKK
CCHHHHHHHHHCCHHHHHHEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH
ARIISNAKLSVRNDMLRAKQDVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCEE
IIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKFNGGFILDRNGIQINNTFEAL
EEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCEEECCHHHHH
INSLRGELEFEVNKVLFD
HHHHCCCEEEEHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA