Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is thiG [H]

Identifier: 18310583

GI number: 18310583

Start: 1874173

End: 1874937

Strand: Reverse

Name: thiG [H]

Synonym: CPE1601

Alternate gene names: 18310583

Gene position: 1874937-1874173 (Counterclockwise)

Preceding gene: 18310584

Following gene: 18310582

Centisome position: 61.85

GC content: 35.69

Gene sequence:

>765_bases
ATGGACAAGTTAATAATAGGTGGAATAGAAATAAAAAATAGACTTTTTGTTGGAAGTGGTAAATATCCTTCAAATGAAAT
AATAAAGGATGTTTTAGAGGGAAGTGGCTCTCAAGTTATAACTTTAGCCTTAAGAAGGGTAGATTTAGATAATAAGGAAG
AGGATATTCTTCAAAATATACCTAAGGATGTAATACTACTTCCTAATACTTCTGGGGCAACTAATGCAGAGGAGGCTATT
AGAATAGCAAGGATAGCAAGAGCTATGGGATGTGGAAACTGGATAAAGATAGAAGTTATATCAGATTCTAAGTATTTGCT
TCCAGATAATGAAGAAACCATAAAGGCAACTAAGGTATTAGCTGATGAAGGCTTTATTGTCCTTCCTTATATGTGTCCTG
ATATTTATGCAGGAAGAAGGTTAATAGAAGCTGGAGCGGCAGCTGTAATGCCACTTGGTGCACCAATAGGAAGTAATAGA
GGGTTAAAGACTAAAGAATTGATTCAAATAATGATAGATGAATTAGATATTCCTATTATAGTTGACGCAGGTATAGGAAA
GCCATCACAGGCTATGGAAGCTATGGAAATGGGAGCTGCAGCTTGTTTAGTTAATACTGCTATAGCATCCTCAGAAGATC
CTATAAATATGGCTAGAGCTTTTAAAGTGGCAGTAGAAGGTGGCAGATTAGCTTATGAAGCTAAAATGGGAAGAGAATCA
AAGTTTGGAAATGCTTCATCTCCACTTACTGGATTTTTAGATTAG

Upstream 100 bases:

>100_bases
TTTAAGTGCTTTTTAGACAGAGTTTATATATAAAAAATAAAATACTAGTCTAAAATATGAAGAAATAAGAAGAGTAGTGA
GTAGAAAAGGGGAATTTTTT

Downstream 100 bases:

>100_bases
GAGATGATTTAATTGAGTTTTTATGATGTAGTAGAAAAATATAGAGATTTTGATTTTTATGGATATTTTGATTCTGTAAA
AAAGGAAGATGTATTAAGAA

Product: thiazole synthase

Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MDKLIIGGIEIKNRLFVGSGKYPSNEIIKDVLEGSGSQVITLALRRVDLDNKEEDILQNIPKDVILLPNTSGATNAEEAI
RIARIARAMGCGNWIKIEVISDSKYLLPDNEETIKATKVLADEGFIVLPYMCPDIYAGRRLIEAGAAAVMPLGAPIGSNR
GLKTKELIQIMIDELDIPIIVDAGIGKPSQAMEAMEMGAAACLVNTAIASSEDPINMARAFKVAVEGGRLAYEAKMGRES
KFGNASSPLTGFLD

Sequences:

>Translated_254_residues
MDKLIIGGIEIKNRLFVGSGKYPSNEIIKDVLEGSGSQVITLALRRVDLDNKEEDILQNIPKDVILLPNTSGATNAEEAI
RIARIARAMGCGNWIKIEVISDSKYLLPDNEETIKATKVLADEGFIVLPYMCPDIYAGRRLIEAGAAAVMPLGAPIGSNR
GLKTKELIQIMIDELDIPIIVDAGIGKPSQAMEAMEMGAAACLVNTAIASSEDPINMARAFKVAVEGGRLAYEAKMGRES
KFGNASSPLTGFLD
>Mature_254_residues
MDKLIIGGIEIKNRLFVGSGKYPSNEIIKDVLEGSGSQVITLALRRVDLDNKEEDILQNIPKDVILLPNTSGATNAEEAI
RIARIARAMGCGNWIKIEVISDSKYLLPDNEETIKATKVLADEGFIVLPYMCPDIYAGRRLIEAGAAAVMPLGAPIGSNR
GLKTKELIQIMIDELDIPIIVDAGIGKPSQAMEAMEMGAAACLVNTAIASSEDPINMARAFKVAVEGGRLAYEAKMGRES
KFGNASSPLTGFLD

Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]

COG id: COG2022

COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiG family [H]

Homologues:

Organism=Escherichia coli, GI48994993, Length=243, Percent_Identity=52.2633744855967, Blast_Score=261, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR008867 [H]

Pfam domain/function: PF05690 ThiG [H]

EC number: NA

Molecular weight: Translated: 27233; Mature: 27233

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLIIGGIEIKNRLFVGSGKYPSNEIIKDVLEGSGSQVITLALRRVDLDNKEEDILQNI
CCCEEEECEEEECEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEHHCCCCCCHHHHHHHC
PKDVILLPNTSGATNAEEAIRIARIARAMGCGNWIKIEVISDSKYLLPDNEETIKATKVL
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCHHHHHHEEE
ADEGFIVLPYMCPDIYAGRRLIEAGAAAVMPLGAPIGSNRGLKTKELIQIMIDELDIPII
ECCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE
VDAGIGKPSQAMEAMEMGAAACLVNTAIASSEDPINMARAFKVAVEGGRLAYEAKMGRES
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCEEEEEECCCCCC
KFGNASSPLTGFLD
CCCCCCCCCCCCCC
>Mature Secondary Structure
MDKLIIGGIEIKNRLFVGSGKYPSNEIIKDVLEGSGSQVITLALRRVDLDNKEEDILQNI
CCCEEEECEEEECEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEHHCCCCCCHHHHHHHC
PKDVILLPNTSGATNAEEAIRIARIARAMGCGNWIKIEVISDSKYLLPDNEETIKATKVL
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCHHHHHHEEE
ADEGFIVLPYMCPDIYAGRRLIEAGAAAVMPLGAPIGSNRGLKTKELIQIMIDELDIPII
ECCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE
VDAGIGKPSQAMEAMEMGAAACLVNTAIASSEDPINMARAFKVAVEGGRLAYEAKMGRES
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCEEEEEECCCCCC
KFGNASSPLTGFLD
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]

Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA