Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310566

Identifier: 18310566

GI number: 18310566

Start: 1856632

End: 1857189

Strand: Reverse

Name: 18310566

Synonym: CPE1584

Alternate gene names: NA

Gene position: 1857189-1856632 (Counterclockwise)

Preceding gene: 18310568

Following gene: 18310565

Centisome position: 61.26

GC content: 29.57

Gene sequence:

>558_bases
ATGAAAAAAAACAAACTATCAATTAAAACAATTGTAGCTATAGGAATTGGCTCAGCAGTTTTTATGATATTAGGTAGATT
TGGTTCTTTGCCTACAGGAATTCCTAATACAAACATAGAAACAGCATATGCGTTTTTAGCTTTAATGGCATTGTTATATG
GTCCTTTAGCTGGTTTTTTAATAGGATTCATAGGACATGCTTTAAAAGATATAGTATTCTTTGGATCACCTTGGATAAGT
TGGGTTTTTGCTTCAGGTATAGTAGGATTAATAATTGGATTTGGAGCTAGATTTATAAAAATTAATCAAGGAGTATTTAA
GTTAAAGCAAATATTTATGTTTAATTTAATACAGATAATTGCCAATGGAGTGGCTTGGTTTTTAGTAGCACCAACTTTAG
ATATATTAATTTACTCTGAACCTGCAAATAAGGTTTATCTACAAGGGGTAATTGGTGGAATTTCTAATATGGTTACTGTT
GGAGTTTTAGGAACTATTTTAATAGCTAATTATGCTAAGACAAGAATACAAAAAGGTAGCTTAAGAAAAGAATATTAG

Upstream 100 bases:

>100_bases
TAATCTTTATAGTTAACTGTGTGAAATTATGTTTATAATTATAGATATTAAAAGGTATTTTATTATCTAAAGATAGATTT
TTCTAAAATGGAGATGAACA

Downstream 100 bases:

>100_bases
AAGTATATGAGGTTGTGGGAAAGATATTTTCAGACAACCTTTTTTTGAAGTTTAATTTAGGAGATGTATAAAACTTAAAT
ATAGAGTTAAAAAATAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKKNKLSIKTIVAIGIGSAVFMILGRFGSLPTGIPNTNIETAYAFLALMALLYGPLAGFLIGFIGHALKDIVFFGSPWIS
WVFASGIVGLIIGFGARFIKINQGVFKLKQIFMFNLIQIIANGVAWFLVAPTLDILIYSEPANKVYLQGVIGGISNMVTV
GVLGTILIANYAKTRIQKGSLRKEY

Sequences:

>Translated_185_residues
MKKNKLSIKTIVAIGIGSAVFMILGRFGSLPTGIPNTNIETAYAFLALMALLYGPLAGFLIGFIGHALKDIVFFGSPWIS
WVFASGIVGLIIGFGARFIKINQGVFKLKQIFMFNLIQIIANGVAWFLVAPTLDILIYSEPANKVYLQGVIGGISNMVTV
GVLGTILIANYAKTRIQKGSLRKEY
>Mature_185_residues
MKKNKLSIKTIVAIGIGSAVFMILGRFGSLPTGIPNTNIETAYAFLALMALLYGPLAGFLIGFIGHALKDIVFFGSPWIS
WVFASGIVGLIIGFGARFIKINQGVFKLKQIFMFNLIQIIANGVAWFLVAPTLDILIYSEPANKVYLQGVIGGISNMVTV
GVLGTILIANYAKTRIQKGSLRKEY

Specific function: Unknown

COG id: COG4720

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0397 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009825
- InterPro:   IPR022914 [H]

Pfam domain/function: PF07155 DUF1393 [H]

EC number: NA

Molecular weight: Translated: 20032; Mature: 20032

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNKLSIKTIVAIGIGSAVFMILGRFGSLPTGIPNTNIETAYAFLALMALLYGPLAGFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IGFIGHALKDIVFFGSPWISWVFASGIVGLIIGFGARFIKINQGVFKLKQIFMFNLIQII
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHHHHHHH
ANGVAWFLVAPTLDILIYSEPANKVYLQGVIGGISNMVTVGVLGTILIANYAKTRIQKGS
HHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LRKEY
CCCCC
>Mature Secondary Structure
MKKNKLSIKTIVAIGIGSAVFMILGRFGSLPTGIPNTNIETAYAFLALMALLYGPLAGFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IGFIGHALKDIVFFGSPWISWVFASGIVGLIIGFGARFIKINQGVFKLKQIFMFNLIQII
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHHHHHHH
ANGVAWFLVAPTLDILIYSEPANKVYLQGVIGGISNMVTVGVLGTILIANYAKTRIQKGS
HHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LRKEY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA