Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310536

Identifier: 18310536

GI number: 18310536

Start: 1822494

End: 1823339

Strand: Reverse

Name: 18310536

Synonym: CPE1554

Alternate gene names: NA

Gene position: 1823339-1822494 (Counterclockwise)

Preceding gene: 18310537

Following gene: 18310534

Centisome position: 60.15

GC content: 26.24

Gene sequence:

>846_bases
ATGATAAAAAAAATAGTTGTAGCTGTAGGTTTAGCATTTAGTTTAAGTTTTTTGGTTGGGTGTGGAAATAAAAGTTTAGT
AGAACAAGGTAAAGCTGCCATAAAACAAGGAAATTATGAAGAAGCTACAGCAATTTTTAAAGCGGCCAGTGAAGAGGATT
CAAAGGATAAAGAAGAAGCTGAAAGCTTATATGATTTAACATATAATTATGTAATATCTAATAAAGCATATAATGAGTTT
AAGTTAGATGTGGCTTTAGATAGTTTAAAGAAAGTAGAAGAAAATAAAAATAAAGAATTAATGAAAGAAGATATTACTAG
TTTAAAAGAAGAAATAAGTAAAGATAAGAGTGTACTAGATGACTTTTACTCAAGTATGGAAAAGGTTAATGATTTAGAGA
GTGAAGGTAAGATATCAGAAGCAAGGGATTTGTTAAATAAATCTCTTAAAAATATTTCTTATTTAGGAGAAAATGTTAAG
GAACTAATTGCAAGTGGAAATTCTAAATTAAAGAATTTAGATGAAAAGCTTGATAAAAAGGAAATAGTTAAAGAAGATAA
TAATAAAGAAGAAAAAACTGATTTCTCTGAAAAAAATAATAAAGAATTAGCAAATAAAGCTTTAGAAACTGTAAAAAATC
TTGGTGTAGTAAAAAAAGATCAATATTTGGAGTTAAAATCTGATGAAGTATATGATTTAGGTGATGGAAGTTACGGTTTT
ATAGTAAATAAATACTATTATCCAGAAGGAAAGCCAGAGCCTGCATTTATATGTCAGTATTTAGTAGATAAAGAATCATG
GAAAGTTAAAGAGGTTAAAGAGGGAATTAAAAAAGAATTAAATTAA

Upstream 100 bases:

>100_bases
GGCTGTATCAAATATAACAAATAAAACTTATTTTGATACATGCCCTTTATTTGTAAAGAGTATATTTTATTAATGGTAAA
TAGGGGAGAGAAGTGAAAAT

Downstream 100 bases:

>100_bases
AAATTTATGACAAACTAGAGTGATATTTTATTCTCTCTAGTTTGTTTAATTTAAATTAAAAGAGTTTAAATTTATGATTC
TTATAGCAATATTTAAATAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIKKIVVAVGLAFSLSFLVGCGNKSLVEQGKAAIKQGNYEEATAIFKAASEEDSKDKEEAESLYDLTYNYVISNKAYNEF
KLDVALDSLKKVEENKNKELMKEDITSLKEEISKDKSVLDDFYSSMEKVNDLESEGKISEARDLLNKSLKNISYLGENVK
ELIASGNSKLKNLDEKLDKKEIVKEDNNKEEKTDFSEKNNKELANKALETVKNLGVVKKDQYLELKSDEVYDLGDGSYGF
IVNKYYYPEGKPEPAFICQYLVDKESWKVKEVKEGIKKELN

Sequences:

>Translated_281_residues
MIKKIVVAVGLAFSLSFLVGCGNKSLVEQGKAAIKQGNYEEATAIFKAASEEDSKDKEEAESLYDLTYNYVISNKAYNEF
KLDVALDSLKKVEENKNKELMKEDITSLKEEISKDKSVLDDFYSSMEKVNDLESEGKISEARDLLNKSLKNISYLGENVK
ELIASGNSKLKNLDEKLDKKEIVKEDNNKEEKTDFSEKNNKELANKALETVKNLGVVKKDQYLELKSDEVYDLGDGSYGF
IVNKYYYPEGKPEPAFICQYLVDKESWKVKEVKEGIKKELN
>Mature_281_residues
MIKKIVVAVGLAFSLSFLVGCGNKSLVEQGKAAIKQGNYEEATAIFKAASEEDSKDKEEAESLYDLTYNYVISNKAYNEF
KLDVALDSLKKVEENKNKELMKEDITSLKEEISKDKSVLDDFYSSMEKVNDLESEGKISEARDLLNKSLKNISYLGENVK
ELIASGNSKLKNLDEKLDKKEIVKEDNNKEEKTDFSEKNNKELANKALETVKNLGVVKKDQYLELKSDEVYDLGDGSYGF
IVNKYYYPEGKPEPAFICQYLVDKESWKVKEVKEGIKKELN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31890; Mature: 31890

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKIVVAVGLAFSLSFLVGCGNKSLVEQGKAAIKQGNYEEATAIFKAASEEDSKDKEEA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHH
ESLYDLTYNYVISNKAYNEFKLDVALDSLKKVEENKNKELMKEDITSLKEEISKDKSVLD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DFYSSMEKVNDLESEGKISEARDLLNKSLKNISYLGENVKELIASGNSKLKNLDEKLDKK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EIVKEDNNKEEKTDFSEKNNKELANKALETVKNLGVVKKDQYLELKSDEVYDLGDGSYGF
HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEECCCCCEEE
IVNKYYYPEGKPEPAFICQYLVDKESWKVKEVKEGIKKELN
EEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKKIVVAVGLAFSLSFLVGCGNKSLVEQGKAAIKQGNYEEATAIFKAASEEDSKDKEEA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHH
ESLYDLTYNYVISNKAYNEFKLDVALDSLKKVEENKNKELMKEDITSLKEEISKDKSVLD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DFYSSMEKVNDLESEGKISEARDLLNKSLKNISYLGENVKELIASGNSKLKNLDEKLDKK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EIVKEDNNKEEKTDFSEKNNKELANKALETVKNLGVVKKDQYLELKSDEVYDLGDGSYGF
HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEECCCCCEEE
IVNKYYYPEGKPEPAFICQYLVDKESWKVKEVKEGIKKELN
EEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA