Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310504

Identifier: 18310504

GI number: 18310504

Start: 1779619

End: 1780164

Strand: Reverse

Name: 18310504

Synonym: CPE1522

Alternate gene names: NA

Gene position: 1780164-1779619 (Counterclockwise)

Preceding gene: 18310505

Following gene: 18310503

Centisome position: 58.72

GC content: 23.63

Gene sequence:

>546_bases
TTGAGTCAAATCTTAAAATCTATAAGTGAAGATGAATTTAAAAATAAAATAAAAATAAGATTTAATAATATATTAGATGG
ATTTGATAGATATTCAAACGGGCTTTTAGAATATAATGGGGATAATGATTCTTTTAAAATAAAAGAGGGATGTTTTATTA
ATTTCTTTAATGAAGCATTAGAGCTTAATAAGGGAAAAGTAATAATAGACTTATACATAAAAGATTTAGAAAATGAGAGT
TTAGCAAGGCTTTTAGAGGTGTTAGATGAAAGGGATAAAAATATTTTGATAGATAATATCAATAAACAGGAAATAAAAAG
TGTTTATTTTGAGCTTAATAATAAAGATTTAATGTCCTTTATAACTAGATTAAATACTAGAGAATTATTCTTTTGCACCA
TATATTTTATGGAAAAGCCTATGACTATATGGGGAAATTATAATTTGAGTTTTCCTATGTTTTTTGAGGGAAATAATATG
CTAGAAATATATAGGGATTTAGCTAAAAAGCATAATTTAGATGTAAGGGGAATAGTATTAAAGTAA

Upstream 100 bases:

>100_bases
TTTAAAATGTAATTTAAGAGATAAATTTTCAATAATATAGCCAAATAAAATAAGCTTTGTGTATAATAATCATAATAAGT
TAAGTGAAGGAGTGTTATTT

Downstream 100 bases:

>100_bases
GCAATTAATTTTGAGGGAATATATGAAGCTTCTTAATAAATTAGTTATTACTTTCTTTATAACAATATCAGTTATTATTT
GTTCATATTTCTTTATGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSQILKSISEDEFKNKIKIRFNNILDGFDRYSNGLLEYNGDNDSFKIKEGCFINFFNEALELNKGKVIIDLYIKDLENES
LARLLEVLDERDKNILIDNINKQEIKSVYFELNNKDLMSFITRLNTRELFFCTIYFMEKPMTIWGNYNLSFPMFFEGNNM
LEIYRDLAKKHNLDVRGIVLK

Sequences:

>Translated_181_residues
MSQILKSISEDEFKNKIKIRFNNILDGFDRYSNGLLEYNGDNDSFKIKEGCFINFFNEALELNKGKVIIDLYIKDLENES
LARLLEVLDERDKNILIDNINKQEIKSVYFELNNKDLMSFITRLNTRELFFCTIYFMEKPMTIWGNYNLSFPMFFEGNNM
LEIYRDLAKKHNLDVRGIVLK
>Mature_180_residues
SQILKSISEDEFKNKIKIRFNNILDGFDRYSNGLLEYNGDNDSFKIKEGCFINFFNEALELNKGKVIIDLYIKDLENESL
ARLLEVLDERDKNILIDNINKQEIKSVYFELNNKDLMSFITRLNTRELFFCTIYFMEKPMTIWGNYNLSFPMFFEGNNML
EIYRDLAKKHNLDVRGIVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21515; Mature: 21384

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQILKSISEDEFKNKIKIRFNNILDGFDRYSNGLLEYNGDNDSFKIKEGCFINFFNEAL
CHHHHHHHCHHHHCCEEEEEEHHHHHHHHHHCCCEEEECCCCCCEEEECCCEEEEHHHHH
ELNKGKVIIDLYIKDLENESLARLLEVLDERDKNILIDNINKQEIKSVYFELNNKDLMSF
HCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCHHHHHH
ITRLNTRELFFCTIYFMEKPMTIWGNYNLSFPMFFEGNNMLEIYRDLAKKHNLDVRGIVL
HHHCCCCCEEEEEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
K
C
>Mature Secondary Structure 
SQILKSISEDEFKNKIKIRFNNILDGFDRYSNGLLEYNGDNDSFKIKEGCFINFFNEAL
HHHHHHHCHHHHCCEEEEEEHHHHHHHHHHCCCEEEECCCCCCEEEECCCEEEEHHHHH
ELNKGKVIIDLYIKDLENESLARLLEVLDERDKNILIDNINKQEIKSVYFELNNKDLMSF
HCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCHHHHHH
ITRLNTRELFFCTIYFMEKPMTIWGNYNLSFPMFFEGNNMLEIYRDLAKKHNLDVRGIVL
HHHCCCCCEEEEEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA