Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310503

Identifier: 18310503

GI number: 18310503

Start: 1779183

End: 1779596

Strand: Reverse

Name: 18310503

Synonym: CPE1521

Alternate gene names: NA

Gene position: 1779596-1779183 (Counterclockwise)

Preceding gene: 18310504

Following gene: 18310501

Centisome position: 58.7

GC content: 21.01

Gene sequence:

>414_bases
ATGAAGCTTCTTAATAAATTAGTTATTACTTTCTTTATAACAATATCAGTTATTATTTGTTCATATTTCTTTATGCCTAT
TAAACTAGAGGCTGCATTTAATATGTTAATAGAAAATCCAGAATATATAGTTGTTACAGAAAAGAAAAATGATTCGGAAT
TTAATAGTTATAAAATAGAAGATGAAAATGATATAGCAAATATATATGATGATATTAAGGAAATAAAAATAGTTAAACCT
TTTAAAAATCCAGTGATTTTAAATGAGTATAATATATATATGGGAGATGATTATATAAGCTTATCATTAAGTGAAGAATT
TATTAAGGTTAATGATGAAACTTTTAGGATAATAGATTCTGGTGATAATTATAAAGAATTACTAAGAGAAATAAAAGAAA
GTTTTCTTAATTAA

Upstream 100 bases:

>100_bases
GGAAATAATATGCTAGAAATATATAGGGATTTAGCTAAAAAGCATAATTTAGATGTAAGGGGAATAGTATTAAAGTAAGC
AATTAATTTTGAGGGAATAT

Downstream 100 bases:

>100_bases
GAGAAAAAGAGAGGAGTTTACTACTCACTCTCTTTTTTATGTATTATTTAACTTCAAATATCCATCCTTCAGGAGCTTCT
ACATCTCCAAATTGCATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKLLNKLVITFFITISVIICSYFFMPIKLEAAFNMLIENPEYIVVTEKKNDSEFNSYKIEDENDIANIYDDIKEIKIVKP
FKNPVILNEYNIYMGDDYISLSLSEEFIKVNDETFRIIDSGDNYKELLREIKESFLN

Sequences:

>Translated_137_residues
MKLLNKLVITFFITISVIICSYFFMPIKLEAAFNMLIENPEYIVVTEKKNDSEFNSYKIEDENDIANIYDDIKEIKIVKP
FKNPVILNEYNIYMGDDYISLSLSEEFIKVNDETFRIIDSGDNYKELLREIKESFLN
>Mature_137_residues
MKLLNKLVITFFITISVIICSYFFMPIKLEAAFNMLIENPEYIVVTEKKNDSEFNSYKIEDENDIANIYDDIKEIKIVKP
FKNPVILNEYNIYMGDDYISLSLSEEFIKVNDETFRIIDSGDNYKELLREIKESFLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16192; Mature: 16192

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLNKLVITFFITISVIICSYFFMPIKLEAAFNMLIENPEYIVVTEKKNDSEFNSYKIE
CCHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHCCCCCEEEEEECCCCCCCCCEECC
DENDIANIYDDIKEIKIVKPFKNPVILNEYNIYMGDDYISLSLSEEFIKVNDETFRIIDS
CCCCHHHHHHHHHHEEEECCCCCCEEEEEEEEEECCCEEEEEECHHEEEECCCEEEEEEC
GDNYKELLREIKESFLN
CCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLLNKLVITFFITISVIICSYFFMPIKLEAAFNMLIENPEYIVVTEKKNDSEFNSYKIE
CCHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHCCCCCEEEEEECCCCCCCCCEECC
DENDIANIYDDIKEIKIVKPFKNPVILNEYNIYMGDDYISLSLSEEFIKVNDETFRIIDS
CCCCHHHHHHHHHHEEEECCCCCCEEEEEEEEEECCCEEEEEECHHEEEECCCEEEEEEC
GDNYKELLREIKESFLN
CCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA