Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310499

Identifier: 18310499

GI number: 18310499

Start: 1774938

End: 1775249

Strand: Reverse

Name: 18310499

Synonym: CPE1517

Alternate gene names: NA

Gene position: 1775249-1774938 (Counterclockwise)

Preceding gene: 18310500

Following gene: 18310498

Centisome position: 58.56

GC content: 24.04

Gene sequence:

>312_bases
ATGGCAAAGATAACTAGTAGAAATAATGATTTCTTAAAAATGCATAGAAATTCAACTTCTCCTAAGGTATATTCTTTATT
AATAGAACTTATAAATGAAGATAGAGAAGACTTAGCTAATGAAGTAATAAAAATAGATTATTTAGTTGATTATTTTAATA
CATGTATCAAAAAAAGAGATAAAAGAGAAGGTAAGGAAACTTTAGAAAGAATAAATTTAAGACTTTCTAAGTTGAAGAAG
GAAGGCGTAGATACTTCTCATTTTGAAACTCTTTGTGAGAATATATTAAAAAACAATAAGATTAAACTTTAG

Upstream 100 bases:

>100_bases
ATAGTTTCTTCTGTTTTTTTCTTTTTACTTATGATATATTAAAGGATGTTATGTCAATAATTTATGTTAAATCATAATTT
ATTTAGAAAGGAAAATAAGT

Downstream 100 bases:

>100_bases
AGTTAAAGAAGGATGGGATGCTAATGGATAAATTTTTAAAGTTAGGATTAAGTGAAGAGGTTTTAAAATCTTTAGTAGGA
TTAGGAATAGAGGAGCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MAKITSRNNDFLKMHRNSTSPKVYSLLIELINEDREDLANEVIKIDYLVDYFNTCIKKRDKREGKETLERINLRLSKLKK
EGVDTSHFETLCENILKNNKIKL

Sequences:

>Translated_103_residues
MAKITSRNNDFLKMHRNSTSPKVYSLLIELINEDREDLANEVIKIDYLVDYFNTCIKKRDKREGKETLERINLRLSKLKK
EGVDTSHFETLCENILKNNKIKL
>Mature_102_residues
AKITSRNNDFLKMHRNSTSPKVYSLLIELINEDREDLANEVIKIDYLVDYFNTCIKKRDKREGKETLERINLRLSKLKKE
GVDTSHFETLCENILKNNKIKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12186; Mature: 12055

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKITSRNNDFLKMHRNSTSPKVYSLLIELINEDREDLANEVIKIDYLVDYFNTCIKKRD
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KREGKETLERINLRLSKLKKEGVDTSHFETLCENILKNNKIKL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKITSRNNDFLKMHRNSTSPKVYSLLIELINEDREDLANEVIKIDYLVDYFNTCIKKRD
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KREGKETLERINLRLSKLKKEGVDTSHFETLCENILKNNKIKL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA