| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310455
Identifier: 18310455
GI number: 18310455
Start: 1730180
End: 1730734
Strand: Reverse
Name: 18310455
Synonym: CPE1473
Alternate gene names: NA
Gene position: 1730734-1730180 (Counterclockwise)
Preceding gene: 18310457
Following gene: 18310454
Centisome position: 57.09
GC content: 22.52
Gene sequence:
>555_bases ATGAATTTAAATGATTTATTAGAGAGTTTAAATTTAGATAATAATATTAATTTAGAGGATATACCAGAATTAGATTTATA TATGGATCAAGTAATACAATTATTTGAAAATAAATTAGGTGGAAATAAGAGATTTGAAGAAGATAAGATTTTAACTAAAA CTATGATTAACAATTATGCTAAGGGAAAATTGTTAATGGATATAAAAAATAAAAAGTATAGTAAGGAACATATTATACTT ATGTGCTTTATATATAATATGAAGGGTATATTAGCCCTTAGTGATATAAAACTAGCTTTAGGAGATATTGTTGAAGGATA TAATAAGGAAGAATTTAATTCAGAGGATATAAGAAAGCTCTATAAAATATATTTAAAGGGACAAGAAAAGAATATAGAAG ATATAAAGCAGGAAATTAATATAGATTTAAATAATTTAGGAGAAGAATTTAATTCTCTAGAAAGTAGTGAAAAGAAATTA CTTTTATCTGCAATGCTTGTGGATAAAGCAAATATATATAAAAAACTAGCTGAAAAAATACTTGATAGTGAATAG
Upstream 100 bases:
>100_bases TAGCTTGAATTTATTTTGATTTCCTTATAATATAATATATATAGGATGAAATGTAGTTTTAGAAACTATGTGATAAATTA AATGGAATGGAAGTGATTTT
Downstream 100 bases:
>100_bases ACATTAAAACACATAAAATGTAACAATTTGTAATTGGTAGTCATAATATATATTAATCATATGATAAAACCTAGGAGGGT AAATTATGGATTATAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNLNDLLESLNLDNNINLEDIPELDLYMDQVIQLFENKLGGNKRFEEDKILTKTMINNYAKGKLLMDIKNKKYSKEHIIL MCFIYNMKGILALSDIKLALGDIVEGYNKEEFNSEDIRKLYKIYLKGQEKNIEDIKQEINIDLNNLGEEFNSLESSEKKL LLSAMLVDKANIYKKLAEKILDSE
Sequences:
>Translated_184_residues MNLNDLLESLNLDNNINLEDIPELDLYMDQVIQLFENKLGGNKRFEEDKILTKTMINNYAKGKLLMDIKNKKYSKEHIIL MCFIYNMKGILALSDIKLALGDIVEGYNKEEFNSEDIRKLYKIYLKGQEKNIEDIKQEINIDLNNLGEEFNSLESSEKKL LLSAMLVDKANIYKKLAEKILDSE >Mature_184_residues MNLNDLLESLNLDNNINLEDIPELDLYMDQVIQLFENKLGGNKRFEEDKILTKTMINNYAKGKLLMDIKNKKYSKEHIIL MCFIYNMKGILALSDIKLALGDIVEGYNKEEFNSEDIRKLYKIYLKGQEKNIEDIKQEINIDLNNLGEEFNSLESSEKKL LLSAMLVDKANIYKKLAEKILDSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21403; Mature: 21403
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNDLLESLNLDNNINLEDIPELDLYMDQVIQLFENKLGGNKRFEEDKILTKTMINNYA CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC KGKLLMDIKNKKYSKEHIILMCFIYNMKGILALSDIKLALGDIVEGYNKEEFNSEDIRKL CCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH YKIYLKGQEKNIEDIKQEINIDLNNLGEEFNSLESSEKKLLLSAMLVDKANIYKKLAEKI HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSE HCCC >Mature Secondary Structure MNLNDLLESLNLDNNINLEDIPELDLYMDQVIQLFENKLGGNKRFEEDKILTKTMINNYA CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC KGKLLMDIKNKKYSKEHIILMCFIYNMKGILALSDIKLALGDIVEGYNKEEFNSEDIRKL CCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH YKIYLKGQEKNIEDIKQEINIDLNNLGEEFNSLESSEKKLLLSAMLVDKANIYKKLAEKI HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSE HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA