Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310393

Identifier: 18310393

GI number: 18310393

Start: 1664307

End: 1664564

Strand: Reverse

Name: 18310393

Synonym: CPE1411

Alternate gene names: NA

Gene position: 1664564-1664307 (Counterclockwise)

Preceding gene: 18310394

Following gene: 18310390

Centisome position: 54.91

GC content: 29.07

Gene sequence:

>258_bases
ATGGAGAGAAATATTGAAAAAAGTATAGGAAAAATATTTAGACATTTTAAAGGTGATCTTTACTTAGTAGAGGGAGTAGT
TACTCATTCAGAAAGTGGAGAGAAGATGGTATTATATAGAGCTTTATATGGAGAGTGTGGCCAATTTGTAAGACCTTATG
ATATGTTTTTAGAAGAAGTTCCAAAGGAAAAAGAAAATCCTACAGGACAGAAATATAGATTTCAAGAATTTGAAGTTAAA
AGCTTAAATAGAAAATAA

Upstream 100 bases:

>100_bases
TTTTAAAGAAATTAAATATAAAATAAAAGGGCGTGTTTCAAAATAAGTTTTATTACTAAATTTTGATACAAACCCTTTTG
TTTTTTAGGAGGAGTTATTA

Downstream 100 bases:

>100_bases
TAATAGTATTTATTAATAGGATCTTTAAATTCTATTTTAAATTAATAAAATTTTAAAATTAAAATAACGTAATAGCTCAG
AAAGTATTTTAAAATCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MERNIEKSIGKIFRHFKGDLYLVEGVVTHSESGEKMVLYRALYGECGQFVRPYDMFLEEVPKEKENPTGQKYRFQEFEVK
SLNRK

Sequences:

>Translated_85_residues
MERNIEKSIGKIFRHFKGDLYLVEGVVTHSESGEKMVLYRALYGECGQFVRPYDMFLEEVPKEKENPTGQKYRFQEFEVK
SLNRK
>Mature_85_residues
MERNIEKSIGKIFRHFKGDLYLVEGVVTHSESGEKMVLYRALYGECGQFVRPYDMFLEEVPKEKENPTGQKYRFQEFEVK
SLNRK

Specific function: Unknown

COG id: COG4728

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10110; Mature: 10110

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERNIEKSIGKIFRHFKGDLYLVEGVVTHSESGEKMVLYRALYGECGQFVRPYDMFLEEV
CCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHC
PKEKENPTGQKYRFQEFEVKSLNRK
CCCCCCCCCCCEECHHHHHHCCCCC
>Mature Secondary Structure
MERNIEKSIGKIFRHFKGDLYLVEGVVTHSESGEKMVLYRALYGECGQFVRPYDMFLEEV
CCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHC
PKEKENPTGQKYRFQEFEVKSLNRK
CCCCCCCCCCCEECHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA