| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is cshA [H]
Identifier: 18310378
GI number: 18310378
Start: 1647504
End: 1649090
Strand: Direct
Name: cshA [H]
Synonym: CPE1396
Alternate gene names: 18310378
Gene position: 1647504-1649090 (Clockwise)
Preceding gene: 18310366
Following gene: 18310380
Centisome position: 54.35
GC content: 31.32
Gene sequence:
>1587_bases ATGAACAATATAAAATTTGATGACTTAGGTCTTAAGGAAAGCTTACTTAAAGCTATAAAAGATATGGGATTTGAAGAGCC ATCTCAAATACAAGCTGAAAGTATTCCTGTAGCCCTAGAAGGACACGATATAATCGGTCAAGCTCAAACTGGTACTGGTA AAACAGCTGCTTTTGGATGCGCTATAATAAATAATGCTGATTTTTCAGGAAAGAAGAAATCTCCAAAAGCACTTATTTTA GCACCAACTAGAGAGCTTGCTATACAAGTTAATGAAGAACTTGTAAGACTTGGAAAACATGAAAAACTTTCTGTTTTACC AATATACGGTGGTCAACCAATAGATAGACAAATTAGAGCTTTAAAAAATGGTGTTGATATAGTTGTTGGAACACCTGGTA GAGTATTAGATTTAATAAGAAGAAAGAGTTTACCTCTTAACGATATAGGATTCCTAGTGTTAGATGAAGCTGACGAAATG TTAAACATGGGATTCATTGATGATTTAGAAGAAATTGTTAAATCATTAAAAACTGATAGACAAACACTTTTATTCTCTGC TACTATGCCTCCGCAAATAAAGAAATTAGCTAGAAATTACATGAAAGAAGATACTAAGCACATCGCAATAAAGAAAAGTT CTTTAACAGTTTCAAAAATAGAACAATTTTATTTTGAAATAAAACATAGAGATAGATTTGAAACACTTTGTAGAGTTTTA GATTTTGATGAACCAAATGCTGCAATAATTTTCTGCAAAACAAAAAAAGGTGTTGACGAAGTTGTAGAAAAAATGCAAGC TAGAGGATATATGGTTGAAGGTATGCACGGAGATATGAGCCAAAACCATAGACTTCAAACTTTAAGAAAATTCAAAGAAG GAAGCTTAGACTTCTTAGTTGCTACTGATGTTGCAGCTAGAGGAATAGACGTTGAAAGCGTAACTCACGTTATAAACTAC GATCTACCACAAGACAATGAAAGTTATGTACATAGAATCGGAAGAACAGGTAGAGCTAACAGAGAGGGAGTTGCTTATTC TTTAGTTACTCCAAAAGAATATATGATGCTTAAGCAAATACAAAAGCATACTAAGAGTAAAATAATAAGAAAAGCTGTAC CTACAGTTGATGAAATATTCCAAAATAAACATAATAACATAATAAATAATGTAAAATCTACTATAGAAGAAGCTTCAGAA GATTTCCAAAAGTTTATTCCAATAGCTACTCAATTAGATGAAGATTATAGCTTAGTAGATGTTGCAGCTGCTCTTTTAAA AATAGTATTTGATAAAGAATCTTCTTTTGATTACACTTCAAATTCTATAGAAGCTCCTGTAATGGACGAAACTAGATTAT TTATGTCTGTTGGAAGAAGAGATGGTATAACTCCTAAATCTCTTGTTAACTTCTTAAAAGAGACTGCTAGAATAAGCCCT AAGCAAGTTGGAGATATAGACATAAAAGAAAACTTCTGCTTTGCTAACGTTGATGCTGATGCAGTAAATAATATAATGAA AAAATCAATGGGTAAAAAACTTAACAAAAGAACTGTTAATATAGAAGTTGCTAAAAAAAGAAAATAA
Upstream 100 bases:
>100_bases GAGATACCTATGTTATGATAAGCTTTGTTTGATTGTGAGAATTTTAAAAATAAAATAAATTTTAAAAACTAAAAATATAC AAGAAGAAAGAGGATAAAGA
Downstream 100 bases:
>100_bases TATAAAAAAATACATACTCATATGAGTATGTATTTTTTTTATTTATTCTTACAACAACCAGATCCATTTGAACATCCACA TCCATTTTTAGAACACCCTC
Product: ATP-dependent RNA helicase, DEAD/DEAH box family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALIL APTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEM LNMGFIDDLEEIVKSLKTDRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLCRVL DFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFLVATDVAARGIDVESVTHVINY DLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMMLKQIQKHTKSKIIRKAVPTVDEIFQNKHNNIINNVKSTIEEASE DFQKFIPIATQLDEDYSLVDVAAALLKIVFDKESSFDYTSNSIEAPVMDETRLFMSVGRRDGITPKSLVNFLKETARISP KQVGDIDIKENFCFANVDADAVNNIMKKSMGKKLNKRTVNIEVAKKRK
Sequences:
>Translated_528_residues MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALIL APTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEM LNMGFIDDLEEIVKSLKTDRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLCRVL DFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFLVATDVAARGIDVESVTHVINY DLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMMLKQIQKHTKSKIIRKAVPTVDEIFQNKHNNIINNVKSTIEEASE DFQKFIPIATQLDEDYSLVDVAAALLKIVFDKESSFDYTSNSIEAPVMDETRLFMSVGRRDGITPKSLVNFLKETARISP KQVGDIDIKENFCFANVDADAVNNIMKKSMGKKLNKRTVNIEVAKKRK >Mature_528_residues MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALIL APTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEM LNMGFIDDLEEIVKSLKTDRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLCRVL DFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFLVATDVAARGIDVESVTHVINY DLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMMLKQIQKHTKSKIIRKAVPTVDEIFQNKHNNIINNVKSTIEEASE DFQKFIPIATQLDEDYSLVDVAAALLKIVFDKESSFDYTSNSIEAPVMDETRLFMSVGRRDGITPKSLVNFLKETARISP KQVGDIDIKENFCFANVDADAVNNIMKKSMGKKLNKRTVNIEVAKKRK
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=364, Percent_Identity=42.032967032967, Blast_Score=303, Evalue=2e-82, Organism=Homo sapiens, GI4503529, Length=365, Percent_Identity=42.1917808219178, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI83700235, Length=365, Percent_Identity=42.4657534246575, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=40.8450704225352, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI13129006, Length=428, Percent_Identity=37.8504672897196, Blast_Score=261, Evalue=2e-69, Organism=Homo sapiens, GI148613856, Length=353, Percent_Identity=39.0934844192635, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI38201710, Length=353, Percent_Identity=39.0934844192635, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=39.2156862745098, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=39.2156862745098, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI164664518, Length=372, Percent_Identity=35.752688172043, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI20149629, Length=377, Percent_Identity=37.9310344827586, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI222352149, Length=361, Percent_Identity=37.3961218836565, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI224593278, Length=378, Percent_Identity=38.3597883597884, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI50659095, Length=412, Percent_Identity=37.1359223300971, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI301171475, Length=376, Percent_Identity=36.7021276595745, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=36.7021276595745, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=36.7021276595745, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI41327771, Length=397, Percent_Identity=35.5163727959698, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=36.7021276595745, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=36.7021276595745, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=35.9550561797753, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=35.9550561797753, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=35.9550561797753, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=35.9550561797753, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=35.5742296918768, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI41327773, Length=349, Percent_Identity=37.2492836676218, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=37.4677002583979, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=37.4677002583979, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI21040371, Length=348, Percent_Identity=35.0574712643678, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI4758112, Length=348, Percent_Identity=35.632183908046, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI18375623, Length=348, Percent_Identity=35.632183908046, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=36.096256684492, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI188035877, Length=373, Percent_Identity=35.3887399463807, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI55749865, Length=353, Percent_Identity=33.7110481586402, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=37.466307277628, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI41327776, Length=377, Percent_Identity=35.0132625994695, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI38327634, Length=357, Percent_Identity=35.8543417366947, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI51094101, Length=354, Percent_Identity=33.3333333333333, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI164419743, Length=354, Percent_Identity=33.3333333333333, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI31542656, Length=371, Percent_Identity=35.0404312668464, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=37.2492836676218, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=33.4246575342466, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI256223453, Length=369, Percent_Identity=33.0623306233062, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI41327779, Length=364, Percent_Identity=33.2417582417582, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=361, Percent_Identity=29.9168975069252, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=34.8082595870207, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI38569505, Length=361, Percent_Identity=29.9168975069252, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=28.2115869017632, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=27.7078085642317, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=31.1526479750779, Blast_Score=143, Evalue=5e-34, Organism=Homo sapiens, GI154759257, Length=451, Percent_Identity=25.0554323725055, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI17505907, Length=203, Percent_Identity=33.4975369458128, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI20336298, Length=203, Percent_Identity=33.4975369458128, Blast_Score=105, Evalue=1e-22, Organism=Escherichia coli, GI87082221, Length=430, Percent_Identity=45.3488372093023, Blast_Score=360, Evalue=1e-100, Organism=Escherichia coli, GI1787016, Length=375, Percent_Identity=40.2666666666667, Blast_Score=284, Evalue=1e-77, Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=38.544474393531, Blast_Score=259, Evalue=3e-70, Organism=Escherichia coli, GI1787605, Length=344, Percent_Identity=39.8255813953488, Blast_Score=254, Evalue=8e-69, Organism=Escherichia coli, GI1788930, Length=357, Percent_Identity=38.375350140056, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI48994977, Length=128, Percent_Identity=25.78125, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=43.1318681318681, Blast_Score=308, Evalue=3e-84, Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=41.4835164835165, Blast_Score=298, Evalue=5e-81, Organism=Caenorhabditis elegans, GI17507121, Length=364, Percent_Identity=41.2087912087912, Blast_Score=297, Evalue=9e-81, Organism=Caenorhabditis elegans, GI17555296, Length=367, Percent_Identity=37.3297002724796, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI32565321, Length=390, Percent_Identity=35.6410256410256, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17537549, Length=355, Percent_Identity=38.3098591549296, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17552114, Length=375, Percent_Identity=34.9333333333333, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=36.4383561643836, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI115533224, Length=389, Percent_Identity=36.2467866323907, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=36.4383561643836, Blast_Score=238, Evalue=8e-63, Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=36.1643835616438, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=37.9213483146067, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17510559, Length=490, Percent_Identity=33.265306122449, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995718, Length=375, Percent_Identity=36.2666666666667, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17552642, Length=378, Percent_Identity=38.3597883597884, Blast_Score=231, Evalue=9e-61, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=35.7142857142857, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71982858, Length=348, Percent_Identity=35.0574712643678, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI115532546, Length=410, Percent_Identity=35.1219512195122, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=35.978835978836, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=33.8753387533875, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17509811, Length=372, Percent_Identity=33.0645161290323, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507879, Length=434, Percent_Identity=31.7972350230415, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI71999646, Length=363, Percent_Identity=34.1597796143251, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI71999644, Length=363, Percent_Identity=34.1597796143251, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17536099, Length=393, Percent_Identity=35.3689567430025, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17536101, Length=393, Percent_Identity=35.3689567430025, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=33.0623306233062, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=35.3689567430025, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=32.8690807799443, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=33.5078534031414, Blast_Score=182, Evalue=5e-46, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=30.1724137931034, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=29.8591549295775, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17507641, Length=394, Percent_Identity=31.4720812182741, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI25148203, Length=415, Percent_Identity=27.2289156626506, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI32564046, Length=381, Percent_Identity=30.9711286089239, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17556951, Length=367, Percent_Identity=28.6103542234332, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71990816, Length=367, Percent_Identity=29.9727520435967, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17508543, Length=384, Percent_Identity=30.7291666666667, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=30.03003003003, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71982862, Length=207, Percent_Identity=37.1980676328502, Blast_Score=131, Evalue=9e-31, Organism=Caenorhabditis elegans, GI25148205, Length=360, Percent_Identity=24.7222222222222, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=46.1538461538462, Blast_Score=103, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=39.7820163487738, Blast_Score=274, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=38.9830508474576, Blast_Score=267, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6322912, Length=365, Percent_Identity=40, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6322323, Length=365, Percent_Identity=40, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=365, Percent_Identity=36.4383561643836, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6325138, Length=374, Percent_Identity=37.7005347593583, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6320041, Length=395, Percent_Identity=36.9620253164557, Blast_Score=247, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=39.7759103641457, Blast_Score=240, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6321856, Length=370, Percent_Identity=39.1891891891892, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6324620, Length=370, Percent_Identity=38.1081081081081, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=385, Percent_Identity=37.4025974025974, Blast_Score=224, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=36.7123287671233, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6320119, Length=374, Percent_Identity=33.4224598930481, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=397, Percent_Identity=34.2569269521411, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6319618, Length=426, Percent_Identity=31.924882629108, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=32.3287671232877, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=401, Percent_Identity=33.4164588528678, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=376, Percent_Identity=30.5851063829787, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=376, Percent_Identity=30.8510638297872, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=390, Percent_Identity=31.025641025641, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=433, Percent_Identity=29.5612009237875, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=29.1105121293801, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320173, Length=185, Percent_Identity=38.9189189189189, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=346, Percent_Identity=27.4566473988439, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=412, Percent_Identity=25.4854368932039, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6322876, Length=184, Percent_Identity=32.6086956521739, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24645031, Length=364, Percent_Identity=41.7582417582418, Blast_Score=292, Evalue=4e-79, Organism=Drosophila melanogaster, GI24582080, Length=364, Percent_Identity=43.956043956044, Blast_Score=289, Evalue=3e-78, Organism=Drosophila melanogaster, GI24582078, Length=364, Percent_Identity=43.956043956044, Blast_Score=289, Evalue=3e-78, Organism=Drosophila melanogaster, GI17136248, Length=364, Percent_Identity=43.956043956044, Blast_Score=289, Evalue=3e-78, Organism=Drosophila melanogaster, GI24582075, Length=364, Percent_Identity=43.956043956044, Blast_Score=289, Evalue=3e-78, Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=39.8876404494382, Blast_Score=271, Evalue=6e-73, Organism=Drosophila melanogaster, GI21355075, Length=355, Percent_Identity=39.4366197183099, Blast_Score=262, Evalue=6e-70, Organism=Drosophila melanogaster, GI24644479, Length=356, Percent_Identity=38.7640449438202, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24644483, Length=356, Percent_Identity=38.7640449438202, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24644487, Length=356, Percent_Identity=38.7640449438202, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI45551833, Length=356, Percent_Identity=38.7640449438202, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24644485, Length=356, Percent_Identity=38.7640449438202, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI281361218, Length=356, Percent_Identity=38.7640449438202, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI24644481, Length=356, Percent_Identity=38.7640449438202, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=38.6666666666667, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI24662330, Length=352, Percent_Identity=38.6363636363636, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24585582, Length=364, Percent_Identity=38.4615384615385, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=36.986301369863, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI24583279, Length=372, Percent_Identity=34.9462365591398, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=34.9462365591398, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=36.3395225464191, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=36.2606232294618, Blast_Score=238, Evalue=5e-63, Organism=Drosophila melanogaster, GI24642151, Length=359, Percent_Identity=35.6545961002786, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI21356161, Length=405, Percent_Identity=35.8024691358025, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=36.2359550561798, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24581954, Length=348, Percent_Identity=36.2068965517241, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24581952, Length=348, Percent_Identity=36.2068965517241, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24581956, Length=348, Percent_Identity=36.2068965517241, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=36.7088607594937, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=34.2939481268012, Blast_Score=209, Evalue=6e-54, Organism=Drosophila melanogaster, GI17136814, Length=383, Percent_Identity=33.9425587467363, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI20130173, Length=439, Percent_Identity=29.6127562642369, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=32.6869806094183, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=32.6869806094183, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI21355559, Length=371, Percent_Identity=33.1536388140162, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=31.8302387267904, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=30.3621169916435, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24666101, Length=362, Percent_Identity=31.4917127071823, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=27.8481012658228, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=31.8042813455657, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24640164, Length=372, Percent_Identity=25.5376344086022, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI19920478, Length=335, Percent_Identity=28.3582089552239, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI18859659, Length=216, Percent_Identity=31.4814814814815, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571338, Length=216, Percent_Identity=31.4814814814815, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI17136666, Length=89, Percent_Identity=38.2022471910112, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 59435; Mature: 59435
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCEECCCCCCCCCCCEEEE AIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRA EEEECCCCCCCCCCCCEEEEECCHHHHEEHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH LKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDR HHCCCEEEECCCHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHCCC QTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLCRVL CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHH DFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFLV CCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEE ATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMMLKQI EEHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHH QKHTKSKIIRKAVPTVDEIFQNKHNNIINNVKSTIEEASEDFQKFIPIATQLDEDYSLVD HHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH VAAALLKIVFDKESSFDYTSNSIEAPVMDETRLFMSVGRRDGITPKSLVNFLKETARISP HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC KQVGDIDIKENFCFANVDADAVNNIMKKSMGKKLNKRTVNIEVAKKRK CCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCC >Mature Secondary Structure MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCEECCCCCCCCCCCEEEE AIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRA EEEECCCCCCCCCCCCEEEEECCHHHHEEHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH LKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDR HHCCCEEEECCCHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHCCC QTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRDRFETLCRVL CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHH DFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFLV CCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEE ATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGVAYSLVTPKEYMMLKQI EEHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHH QKHTKSKIIRKAVPTVDEIFQNKHNNIINNVKSTIEEASEDFQKFIPIATQLDEDYSLVD HHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH VAAALLKIVFDKESSFDYTSNSIEAPVMDETRLFMSVGRRDGITPKSLVNFLKETARISP HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC KQVGDIDIKENFCFANVDADAVNNIMKKSMGKKLNKRTVNIEVAKKRK CCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]