Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18310334

Identifier: 18310334

GI number: 18310334

Start: 1596413

End: 1596976

Strand: Direct

Name: 18310334

Synonym: CPE1352

Alternate gene names: NA

Gene position: 1596413-1596976 (Clockwise)

Preceding gene: 18310332

Following gene: 18310338

Centisome position: 52.66

GC content: 25.0

Gene sequence:

>564_bases
ATGAAAGAACTTGAAACACGTATTATAGATATAGATGTTGAAAAGCTAAGAGAAACATTAAATAAACTTGGAGCGAAAAA
TGTAAAGCGTGAAAATCAAACAAACGATATTTTTGATTTTCCAGATAGAAAATTATTAGATAAAAAAGGTTATGCAAGAA
TAAGAACTGTTGAAGACCTTATAAACAATAAAACAGTTTATTTTATGACTACAAAAAAAATGCTTAGCCAAGATAAGTTT
AAAGTAATGGAAGAAAATGAAACAATCATAGAAGATGGAGCTATGGGTAAAAATATCTTTAAATCTTTAGGATTAGAATT
ATTTGAAACTATAAAGAAATATAGAGAAAGCTATAAATATAAAGATTCATTAATAGAAATAGATATTAATGACCCATCAT
TTTGTCCATTTCCATACATAGAAATAGAAACTTCTTCTGAAGAAAAACTTAATGAAATTTTAATAGACTTAGGCTATTCA
ATGGAAGATACAACATCTAAAACAATTTATGAAATTTTAAAAGATAAAGGTATTTCCCCTGATTCTAATAAAAAAGGACT
TTAG

Upstream 100 bases:

>100_bases
ATTTTATCAAAGTATAAAGGAAAAATCACCATACTATTCTTTTCTCCCTTTAACAATTTGTTTATAATAATATTATAAAG
AATTTGGAGGTAGTTTAATT

Downstream 100 bases:

>100_bases
ATAATAGCCTTCATTTATAAAAATTATAAAAATACAAGTAATTTTCCCTGAAGAAAAATTTATTTAAAGAAAAGACATTA
TATAGTTTTGTTTTTTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Adenylyl Cyclase CyaB

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKELETRIIDIDVEKLRETLNKLGAKNVKRENQTNDIFDFPDRKLLDKKGYARIRTVEDLINNKTVYFMTTKKMLSQDKF
KVMEENETIIEDGAMGKNIFKSLGLELFETIKKYRESYKYKDSLIEIDINDPSFCPFPYIEIETSSEEKLNEILIDLGYS
MEDTTSKTIYEILKDKGISPDSNKKGL

Sequences:

>Translated_187_residues
MKELETRIIDIDVEKLRETLNKLGAKNVKRENQTNDIFDFPDRKLLDKKGYARIRTVEDLINNKTVYFMTTKKMLSQDKF
KVMEENETIIEDGAMGKNIFKSLGLELFETIKKYRESYKYKDSLIEIDINDPSFCPFPYIEIETSSEEKLNEILIDLGYS
MEDTTSKTIYEILKDKGISPDSNKKGL
>Mature_187_residues
MKELETRIIDIDVEKLRETLNKLGAKNVKRENQTNDIFDFPDRKLLDKKGYARIRTVEDLINNKTVYFMTTKKMLSQDKF
KVMEENETIIEDGAMGKNIFKSLGLELFETIKKYRESYKYKDSLIEIDINDPSFCPFPYIEIETSSEEKLNEILIDLGYS
MEDTTSKTIYEILKDKGISPDSNKKGL

Specific function: Unknown

COG id: COG1437

COG function: function code F; Adenylate cyclase, class 2 (thermophilic)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21863; Mature: 21863

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELETRIIDIDVEKLRETLNKLGAKNVKRENQTNDIFDFPDRKLLDKKGYARIRTVEDL
CCCHHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHH
INNKTVYFMTTKKMLSQDKFKVMEENETIIEDGAMGKNIFKSLGLELFETIKKYRESYKY
HCCCEEEEEEHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHCHHHHHHHHHHHHHHCC
KDSLIEIDINDPSFCPFPYIEIETSSEEKLNEILIDLGYSMEDTTSKTIYEILKDKGISP
CCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
DSNKKGL
CCCCCCC
>Mature Secondary Structure
MKELETRIIDIDVEKLRETLNKLGAKNVKRENQTNDIFDFPDRKLLDKKGYARIRTVEDL
CCCHHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHH
INNKTVYFMTTKKMLSQDKFKVMEENETIIEDGAMGKNIFKSLGLELFETIKKYRESYKY
HCCCEEEEEEHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHCHHHHHHHHHHHHHHCC
KDSLIEIDINDPSFCPFPYIEIETSSEEKLNEILIDLGYSMEDTTSKTIYEILKDKGISP
CCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
DSNKKGL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA