| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310331
Identifier: 18310331
GI number: 18310331
Start: 1593786
End: 1594220
Strand: Direct
Name: 18310331
Synonym: CPE1349
Alternate gene names: NA
Gene position: 1593786-1594220 (Clockwise)
Preceding gene: 18310330
Following gene: 18310332
Centisome position: 52.58
GC content: 23.68
Gene sequence:
>435_bases ATGAAAAATACCCTAATTTCATCAGTAATATTTTTTTCCCTCCTTGCTTCTGTTTTATTTTTTAATAATAAACTAATAAA TGTATGTGACAAGGTAAATGATTATAGTAATAAAATAGAAAGTTCCTTAAGTAAAGAGGATTGGAAGGAATCTTATAAAG AGTCTTTAAAGTTAAGTAATCTCTTAGAAGAAAATTATGTTTCTTTATCTCTTTACATAAATCATGAACAATTAGATAAT TTAAGTAAGGAAATACTTAGTCTAACTCAATATATAAAGGCTGAAGATGTTTCCAACAGTTTATCCTCAGTACATATAAT CAAGAGCTATACAAAGCATATAAAGGATATTCAGAAGGTTAATATAGGTAATATTTTAAATTCCAACCTAAAAAATATAT TTTATTGTGGAATTTATAATGATTTTAGTTTATAA
Upstream 100 bases:
>100_bases ATTATCCACCTAGAGATAAATTATTCCTAGTTATGATGGATTCTAATGGGAAATTATTTATTCAAAGAAAAAATCAGAAA GATAAGGAGGACATCATACT
Downstream 100 bases:
>100_bases TGTTATTGAAAGGGGCAAGTCCCGCATGGACTTTTTTTGTCCCTATATATAAATCTAATAAAAGTTAATGAAAGATTTTG AAAGGTGGTAAACAAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKNTLISSVIFFSLLASVLFFNNKLINVCDKVNDYSNKIESSLSKEDWKESYKESLKLSNLLEENYVSLSLYINHEQLDN LSKEILSLTQYIKAEDVSNSLSSVHIIKSYTKHIKDIQKVNIGNILNSNLKNIFYCGIYNDFSL
Sequences:
>Translated_144_residues MKNTLISSVIFFSLLASVLFFNNKLINVCDKVNDYSNKIESSLSKEDWKESYKESLKLSNLLEENYVSLSLYINHEQLDN LSKEILSLTQYIKAEDVSNSLSSVHIIKSYTKHIKDIQKVNIGNILNSNLKNIFYCGIYNDFSL >Mature_144_residues MKNTLISSVIFFSLLASVLFFNNKLINVCDKVNDYSNKIESSLSKEDWKESYKESLKLSNLLEENYVSLSLYINHEQLDN LSKEILSLTQYIKAEDVSNSLSSVHIIKSYTKHIKDIQKVNIGNILNSNLKNIFYCGIYNDFSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16585; Mature: 16585
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTLISSVIFFSLLASVLFFNNKLINVCDKVNDYSNKIESSLSKEDWKESYKESLKLSN CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEENYVSLSLYINHEQLDNLSKEILSLTQYIKAEDVSNSLSSVHIIKSYTKHIKDIQKV HHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NIGNILNSNLKNIFYCGIYNDFSL CHHHHHHHCHHHEEEEECCCCCCC >Mature Secondary Structure MKNTLISSVIFFSLLASVLFFNNKLINVCDKVNDYSNKIESSLSKEDWKESYKESLKLSN CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEENYVSLSLYINHEQLDNLSKEILSLTQYIKAEDVSNSLSSVHIIKSYTKHIKDIQKV HHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NIGNILNSNLKNIFYCGIYNDFSL CHHHHHHHCHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA