| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is mglC [H]
Identifier: 18310325
GI number: 18310325
Start: 1586015
End: 1587043
Strand: Direct
Name: mglC [H]
Synonym: CPE1343
Alternate gene names: 18310325
Gene position: 1586015-1587043 (Clockwise)
Preceding gene: 18310324
Following gene: 18310327
Centisome position: 52.32
GC content: 32.56
Gene sequence:
>1029_bases ATGCAAACCAAATCAAAGAAAAAGTTTAATTTAAATAGCCAATGGTTAATGAATAATGCTATTTATATAGTTTTAGTGGC CTTATTAATAGGAATTTGTATTATTTCACCAGATTTTTTATCATTAAAAAACTTTATTAATATATTAAGCCAATCCTCTT CTCGTATAATAATAGCTCTTGGAGTTGGAGGAATACTTTTAACTGAAGGTACTGACCTTTCTGCTGGTAGAACAGTTGGA CTTGCTGCCGTAGTATCAGCTTCTTTACTTCAAGCTGGAGATTATGCATATAAAATGTATCCTAATTTACCTGAATTACC TATATTCATTCCAATTTTAATAGCAATGGCTGTTTGTGGAATAGTTGGTCTTGTAAATGGATTAGTTGTTTCTAAATTTA ATGTTCCTCCATTTATAGCTACTCTAGGAATGATGACAGGAATATATGGACTTAACTCAATATACTTTGATAGACCTCCA TATGGAGCTATGCCAATAGGTGGTCTTAGCCAATCCTTTAGTAATTTTACACTTGGTTCCATTCCTATATATGGAAATAT AAAAATACCTTATTTAGTTATATATGCAATTATTGTAATAGCTGTAATTTGGACTTTATGGAATAAAACTAAATTTGGTA AAAACCTTTATGCCATAGGTGGTAACAGAGAAGCTGCAGTGGTTTCAGGTGTAAATGTTGTTAGAACACTTTTATTAGTT TATATGTTAGCTGGAGTTCTTTATGGTTTTGCAGGTACTCTAGAAGCTGGTCGTGTTGGTAGTGCTACTGCTAGTACTGG TGAAATGTATGAACTAGATGCCATAGCTTCCTGTGTTGTTGGTGGTGTTTCCACTGCTGGTGGTGTTGGTACTGTTCCTG GAATAGTAACTGGTGTTTTAATATTCCAAGTTATAAACTATGGTCTAGCTTTTATAGGTGTTAGCCCTTATTTACAATTC GTTATAAAAGGTTTAATTATAGTTCTAGCTGTAGCTCTTGATATGAGAAAATACATGAAAAAGAACTAA
Upstream 100 bases:
>100_bases AATGGTAGGGTTTCTGGCATAGTTAATGCTAATGAGACTACCCAAGAGGAAATTATGCATCTATCTGCAAAATATCTATC AGTAACAGGAGGAGTTAACA
Downstream 100 bases:
>100_bases TAAAAAATGTATGGAAGAAATATTTCTTCCATACATTTTTTTACATATACTCAAATTCAAAAGTTGTTTTTTGATAATAC TCTTCATCCTTTTTAAGTAT
Product: beta-methylgalactoside transporter inner membrane component
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MQTKSKKKFNLNSQWLMNNAIYIVLVALLIGICIISPDFLSLKNFINILSQSSSRIIIALGVGGILLTEGTDLSAGRTVG LAAVVSASLLQAGDYAYKMYPNLPELPIFIPILIAMAVCGIVGLVNGLVVSKFNVPPFIATLGMMTGIYGLNSIYFDRPP YGAMPIGGLSQSFSNFTLGSIPIYGNIKIPYLVIYAIIVIAVIWTLWNKTKFGKNLYAIGGNREAAVVSGVNVVRTLLLV YMLAGVLYGFAGTLEAGRVGSATASTGEMYELDAIASCVVGGVSTAGGVGTVPGIVTGVLIFQVINYGLAFIGVSPYLQF VIKGLIIVLAVALDMRKYMKKN
Sequences:
>Translated_342_residues MQTKSKKKFNLNSQWLMNNAIYIVLVALLIGICIISPDFLSLKNFINILSQSSSRIIIALGVGGILLTEGTDLSAGRTVG LAAVVSASLLQAGDYAYKMYPNLPELPIFIPILIAMAVCGIVGLVNGLVVSKFNVPPFIATLGMMTGIYGLNSIYFDRPP YGAMPIGGLSQSFSNFTLGSIPIYGNIKIPYLVIYAIIVIAVIWTLWNKTKFGKNLYAIGGNREAAVVSGVNVVRTLLLV YMLAGVLYGFAGTLEAGRVGSATASTGEMYELDAIASCVVGGVSTAGGVGTVPGIVTGVLIFQVINYGLAFIGVSPYLQF VIKGLIIVLAVALDMRKYMKKN >Mature_342_residues MQTKSKKKFNLNSQWLMNNAIYIVLVALLIGICIISPDFLSLKNFINILSQSSSRIIIALGVGGILLTEGTDLSAGRTVG LAAVVSASLLQAGDYAYKMYPNLPELPIFIPILIAMAVCGIVGLVNGLVVSKFNVPPFIATLGMMTGIYGLNSIYFDRPP YGAMPIGGLSQSFSNFTLGSIPIYGNIKIPYLVIYAIIVIAVIWTLWNKTKFGKNLYAIGGNREAAVVSGVNVVRTLLLV YMLAGVLYGFAGTLEAGRVGSATASTGEMYELDAIASCVVGGVSTAGGVGTVPGIVTGVLIFQVINYGLAFIGVSPYLQF VIKGLIIVLAVALDMRKYMKKN
Specific function: Part of the binding-protein-dependent transport system for galactoside. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4211
COG function: function code G; ABC-type glucose/galactose transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788471, Length=342, Percent_Identity=56.7251461988304, Blast_Score=310, Evalue=8e-86, Organism=Escherichia coli, GI1790191, Length=336, Percent_Identity=35.1190476190476, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1790524, Length=335, Percent_Identity=34.0298507462687, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI145693152, Length=337, Percent_Identity=31.1572700296736, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1788896, Length=330, Percent_Identity=30, Blast_Score=128, Evalue=5e-31, Organism=Escherichia coli, GI1789992, Length=350, Percent_Identity=30.8571428571429, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI87082395, Length=305, Percent_Identity=31.1475409836066, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI145693214, Length=282, Percent_Identity=29.7872340425532, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787793, Length=311, Percent_Identity=27.6527331189711, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787794, Length=333, Percent_Identity=26.1261261261261, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 36272; Mature: 36272
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTKSKKKFNLNSQWLMNNAIYIVLVALLIGICIISPDFLSLKNFINILSQSSSRIIIAL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE GVGGILLTEGTDLSAGRTVGLAAVVSASLLQAGDYAYKMYPNLPELPIFIPILIAMAVCG ECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHH IVGLVNGLVVSKFNVPPFIATLGMMTGIYGLNSIYFDRPPYGAMPIGGLSQSFSNFTLGS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHCCCCCCC IPIYGNIKIPYLVIYAIIVIAVIWTLWNKTKFGKNLYAIGGNREAAVVSGVNVVRTLLLV EEEEECCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCHHHHHHHHHHHHHHHH YMLAGVLYGFAGTLEAGRVGSATASTGEMYELDAIASCVVGGVSTAGGVGTVPGIVTGVL HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IFQVINYGLAFIGVSPYLQFVIKGLIIVLAVALDMRKYMKKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTKSKKKFNLNSQWLMNNAIYIVLVALLIGICIISPDFLSLKNFINILSQSSSRIIIAL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE GVGGILLTEGTDLSAGRTVGLAAVVSASLLQAGDYAYKMYPNLPELPIFIPILIAMAVCG ECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHH IVGLVNGLVVSKFNVPPFIATLGMMTGIYGLNSIYFDRPPYGAMPIGGLSQSFSNFTLGS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHCCCCCCC IPIYGNIKIPYLVIYAIIVIAVIWTLWNKTKFGKNLYAIGGNREAAVVSGVNVVRTLLLV EEEEECCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCHHHHHHHHHHHHHHHH YMLAGVLYGFAGTLEAGRVGSATASTGEMYELDAIASCVVGGVSTAGGVGTVPGIVTGVL HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IFQVINYGLAFIGVSPYLQFVIKGLIIVLAVALDMRKYMKKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]