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The map label for this gene is yhbA [H]

Identifier: 18310302

GI number: 18310302

Start: 1561749

End: 1562741

Strand: Reverse

Name: yhbA [H]

Synonym: CPE1320

Alternate gene names: 18310302

Gene position: 1562741-1561749 (Counterclockwise)

Preceding gene: 18310303

Following gene: 18310301

Centisome position: 51.55

GC content: 27.49

Gene sequence:

>993_bases
TTGAAGGAAAAGATTTTAGAGTTTTGTAAATCTTTGGGATTAGATACTGTGGGATTTGTAAAGTGTAGAAGATTTTCAGA
ACTTGAAGAGGTGTACAATATAAGAAAAGATAAAGGGTTTGAAAATGAGTTTGAGGAACAGGATATAGAGAAAAGAGTGA
ATCCTAATGTGTACATGGAAGACGGGAAGACCATAATAACAATTGCTTTTCCTTATTTATATAATGAAGACTATGTTGAT
AATGGATTTTCAGTTTATACTAGAGGAATGGACTATCATTATGTTGTCTCTAATTTCCTTAAGAAGATAAGCGAATATAT
AGAGTCTTTAGGGGGACGGGCAATTTCTTTAGTTGATAGTAATTCATTACCTGAAAGATATATTGCATACTTAGGTAATA
TAGGATTCATAGGTAAAAACAATATGCTAATCACTAAAAAGTATGGTTCCTATGTGTTTTTAGGAGAAATAATTACGGAT
TTAGAAATTCAGTGTGAAGAAGAAAGAACTTTAGAGGAATTAAGAACTCATAAGGAATGTGGTACCTGTGAGATATGCTA
TAAAAATTGCCCAACTAAGGTTTTAAATAGAAGTAAGATGAAAAATACTAATTCATGTATGTCTTATATAACTCAGAAAA
AAGATATAGAAGATAAATATTTAAAACTTATGAAGGGAAGAATATTTGGATGTGATAGCTGTCAAAAAGAGTGTCCATAT
AATAAGGAAATAACTTATACAAATATAGAAGATTTTAAACCTCTTACTTTTATGCAAAAGGATTCTTTTGAAGATTTTCA
TCAAATAAGTAAAAAAGAATTTAATGAAACCTTTAAAAAGACTTCTTGTGGATGGAGAGGTAAAAATACAATTTTAAGGA
ATATAATGATTAAAAAGGTCTTAATTAATAAGGAAGATATATCAAACTATCAATTAAATTCTGAAAGTCTTAAAAATTTT
AGAAATAGACTTTTAAATTTTTATGATGTATAA

Upstream 100 bases:

>100_bases
ATATATAAATTTTATTAGTTAGAGAAAAATTAAAACCATATGTTTTACATTTACTAACTAAAAATTTAATATAGTCTTTT
TTAGTTTGAGGTGATAATTT

Downstream 100 bases:

>100_bases
TAATATATTGTTAAAATTTGATACAGGAGGTAAAGTTATGTTTACTCGTATAGGAGCTAATATATTAGTTAGATTACCGG
ATAGTATTTTTAAACCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKEKILEFCKSLGLDTVGFVKCRRFSELEEVYNIRKDKGFENEFEEQDIEKRVNPNVYMEDGKTIITIAFPYLYNEDYVD
NGFSVYTRGMDYHYVVSNFLKKISEYIESLGGRAISLVDSNSLPERYIAYLGNIGFIGKNNMLITKKYGSYVFLGEIITD
LEIQCEEERTLEELRTHKECGTCEICYKNCPTKVLNRSKMKNTNSCMSYITQKKDIEDKYLKLMKGRIFGCDSCQKECPY
NKEITYTNIEDFKPLTFMQKDSFEDFHQISKKEFNETFKKTSCGWRGKNTILRNIMIKKVLINKEDISNYQLNSESLKNF
RNRLLNFYDV

Sequences:

>Translated_330_residues
MKEKILEFCKSLGLDTVGFVKCRRFSELEEVYNIRKDKGFENEFEEQDIEKRVNPNVYMEDGKTIITIAFPYLYNEDYVD
NGFSVYTRGMDYHYVVSNFLKKISEYIESLGGRAISLVDSNSLPERYIAYLGNIGFIGKNNMLITKKYGSYVFLGEIITD
LEIQCEEERTLEELRTHKECGTCEICYKNCPTKVLNRSKMKNTNSCMSYITQKKDIEDKYLKLMKGRIFGCDSCQKECPY
NKEITYTNIEDFKPLTFMQKDSFEDFHQISKKEFNETFKKTSCGWRGKNTILRNIMIKKVLINKEDISNYQLNSESLKNF
RNRLLNFYDV
>Mature_330_residues
MKEKILEFCKSLGLDTVGFVKCRRFSELEEVYNIRKDKGFENEFEEQDIEKRVNPNVYMEDGKTIITIAFPYLYNEDYVD
NGFSVYTRGMDYHYVVSNFLKKISEYIESLGGRAISLVDSNSLPERYIAYLGNIGFIGKNNMLITKKYGSYVFLGEIITD
LEIQCEEERTLEELRTHKECGTCEICYKNCPTKVLNRSKMKNTNSCMSYITQKKDIEDKYLKLMKGRIFGCDSCQKECPY
NKEITYTNIEDFKPLTFMQKDSFEDFHQISKKEFNETFKKTSCGWRGKNTILRNIMIKKVLINKEDISNYQLNSESLKNF
RNRLLNFYDV

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=313, Percent_Identity=27.4760383386581, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 38902; Mature: 38902

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00559 MOLYBDOPTERIN_EUK ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKILEFCKSLGLDTVGFVKCRRFSELEEVYNIRKDKGFENEFEEQDIEKRVNPNVYME
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEE
DGKTIITIAFPYLYNEDYVDNGFSVYTRGMDYHYVVSNFLKKISEYIESLGGRAISLVDS
CCCEEEEEEECHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECC
NSLPERYIAYLGNIGFIGKNNMLITKKYGSYVFLGEIITDLEIQCEEERTLEELRTHKEC
CCCHHHHHHHHCCCCEECCCCEEEEECCCCEEEEHHHHHCCCEEECHHHHHHHHHHHHCC
GTCEICYKNCPTKVLNRSKMKNTNSCMSYITQKKDIEDKYLKLMKGRIFGCDSCQKECPY
CCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHCCC
NKEITYTNIEDFKPLTFMQKDSFEDFHQISKKEFNETFKKTSCGWRGKNTILRNIMIKKV
CCCEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LINKEDISNYQLNSESLKNFRNRLLNFYDV
HHCHHHCCCCEECHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEKILEFCKSLGLDTVGFVKCRRFSELEEVYNIRKDKGFENEFEEQDIEKRVNPNVYME
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEE
DGKTIITIAFPYLYNEDYVDNGFSVYTRGMDYHYVVSNFLKKISEYIESLGGRAISLVDS
CCCEEEEEEECHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECC
NSLPERYIAYLGNIGFIGKNNMLITKKYGSYVFLGEIITDLEIQCEEERTLEELRTHKEC
CCCHHHHHHHHCCCCEECCCCEEEEECCCCEEEEHHHHHCCCEEECHHHHHHHHHHHHCC
GTCEICYKNCPTKVLNRSKMKNTNSCMSYITQKKDIEDKYLKLMKGRIFGCDSCQKECPY
CCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHCCC
NKEITYTNIEDFKPLTFMQKDSFEDFHQISKKEFNETFKKTSCGWRGKNTILRNIMIKKV
CCCEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LINKEDISNYQLNSESLKNFRNRLLNFYDV
HHCHHHCCCCEECHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]