| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is 18310301
Identifier: 18310301
GI number: 18310301
Start: 1561007
End: 1561711
Strand: Reverse
Name: 18310301
Synonym: CPE1319
Alternate gene names: NA
Gene position: 1561711-1561007 (Counterclockwise)
Preceding gene: 18310302
Following gene: 18310300
Centisome position: 51.52
GC content: 30.35
Gene sequence:
>705_bases ATGTTTACTCGTATAGGAGCTAATATATTAGTTAGATTACCGGATAGTATTTTTAAACCAATAGCAGGAAAGTTAATCGG TGGATGTTTAAATAAATATGCTGACCTTAATGTTTATGGACTTGATAAAATAAAGAAGGAAGAGGGTCCATTTATATTTA TAGGAAATCATTTAAGTAATGCAGATGGATTAGTTTTAGATAAGGTTTTACAAAAAGAATATGATCCATATTTTATTGCT GGAGTAAAGCTAAATGATGAGGCTTTAACTAATATAGGTACAAGATTAGTTAAAAATATAAAAATAAAGCCAAATTCAGC AGACAGAGAATCCCTAAGCAAAATTGTTAAGGCTGTTAAGGGTGGAGAAAATATAGTTATTTTCCCAGAAGGAACAAGAA GTAGAAATGCAAAAATGATAGAAGCTAAAAAGGGAATTATACTTATAGCAAGATTAACAAAGGCCAAAATAGTACCTTTT GGAATGACTGGAACTGAAAAGCTTATGCCAATAAATGATGAAAATATGGGAGCAGAAAAGTTTCATCATTCAAAGGTTAA CATAAAGTTTGGAACTCCTATGGACCTTCCAAAGAAAGAAAAAGATGAAGGAAAGCATGAGTATGAAGAAAGAGCTTTAA ATTATCTTATGAAAAATATAGCCAATCTTTTACCAGAAGATTATAGAGGGGTATATAAGGATTAG
Upstream 100 bases:
>100_bases CAATTAAATTCTGAAAGTCTTAAAAATTTTAGAAATAGACTTTTAAATTTTTATGATGTATAATAATATATTGTTAAAAT TTGATACAGGAGGTAAAGTT
Downstream 100 bases:
>100_bases GGGGACATATTATGAAAAAGAGAACTAAAGAGGTATTAGAAATATTAAAAGAAGAGTATCCAGATGCTAAGTGTGAGCTA AATTATGAAACTCCCTTTCA
Product: acyltransferase
Products: NA
Alternate protein names: 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase; Acyltransferase; AMP-Dependent Synthetase And Ligase; Long-Chain-Fatty-Acid-CoA Ligase; Long-Chain-Fatty-Acid CoA Ligase; Glycerol-3-Phosphate O-Acyltransferase; Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; Acyltransferase Domain Protein
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MFTRIGANILVRLPDSIFKPIAGKLIGGCLNKYADLNVYGLDKIKKEEGPFIFIGNHLSNADGLVLDKVLQKEYDPYFIA GVKLNDEALTNIGTRLVKNIKIKPNSADRESLSKIVKAVKGGENIVIFPEGTRSRNAKMIEAKKGIILIARLTKAKIVPF GMTGTEKLMPINDENMGAEKFHHSKVNIKFGTPMDLPKKEKDEGKHEYEERALNYLMKNIANLLPEDYRGVYKD
Sequences:
>Translated_234_residues MFTRIGANILVRLPDSIFKPIAGKLIGGCLNKYADLNVYGLDKIKKEEGPFIFIGNHLSNADGLVLDKVLQKEYDPYFIA GVKLNDEALTNIGTRLVKNIKIKPNSADRESLSKIVKAVKGGENIVIFPEGTRSRNAKMIEAKKGIILIARLTKAKIVPF GMTGTEKLMPINDENMGAEKFHHSKVNIKFGTPMDLPKKEKDEGKHEYEERALNYLMKNIANLLPEDYRGVYKD >Mature_234_residues MFTRIGANILVRLPDSIFKPIAGKLIGGCLNKYADLNVYGLDKIKKEEGPFIFIGNHLSNADGLVLDKVLQKEYDPYFIA GVKLNDEALTNIGTRLVKNIKIKPNSADRESLSKIVKAVKGGENIVIFPEGTRSRNAKMIEAKKGIILIARLTKAKIVPF GMTGTEKLMPINDENMGAEKFHHSKVNIKFGTPMDLPKKEKDEGKHEYEERALNYLMKNIANLLPEDYRGVYKD
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26204; Mature: 26204
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTRIGANILVRLPDSIFKPIAGKLIGGCLNKYADLNVYGLDKIKKEEGPFIFIGNHLSN CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHCCCCEEEEECCCCC ADGLVLDKVLQKEYDPYFIAGVKLNDEALTNIGTRLVKNIKIKPNSADRESLSKIVKAVK CCCHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHC GGENIVIFPEGTRSRNAKMIEAKKGIILIARLTKAKIVPFGMTGTEKLMPINDENMGAEK CCCEEEEEECCCCCCCCEEEECCCCEEEEEEECCCEEEEECCCCCCCEECCCCCCCCHHH FHHSKVNIKFGTPMDLPKKEKDEGKHEYEERALNYLMKNIANLLPEDYRGVYKD HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC >Mature Secondary Structure MFTRIGANILVRLPDSIFKPIAGKLIGGCLNKYADLNVYGLDKIKKEEGPFIFIGNHLSN CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHCCCCEEEEECCCCC ADGLVLDKVLQKEYDPYFIAGVKLNDEALTNIGTRLVKNIKIKPNSADRESLSKIVKAVK CCCHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHC GGENIVIFPEGTRSRNAKMIEAKKGIILIARLTKAKIVPFGMTGTEKLMPINDENMGAEK CCCEEEEEECCCCCCCCEEEECCCCEEEEEEECCCEEEEECCCCCCCEECCCCCCCCHHH FHHSKVNIKFGTPMDLPKKEKDEGKHEYEERALNYLMKNIANLLPEDYRGVYKD HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA