Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yhjL [C]

Identifier: 18310275

GI number: 18310275

Start: 1527481

End: 1528470

Strand: Direct

Name: yhjL [C]

Synonym: CPE1293

Alternate gene names: 18310275

Gene position: 1527481-1528470 (Clockwise)

Preceding gene: 18310268

Following gene: 18310299

Centisome position: 50.39

GC content: 26.67

Gene sequence:

>990_bases
ATGACTTCATTTCAATCATTAATAATAATACTTATATGTATTTTATCCATAATTATAATTTTATATTTAATAGAGTCAGA
TAATTTTCTGCCAGAAAAACAAATAAGGAAATATGTCTCTCTAGGGAAATTTAAACATGCTCTTTATCTTTTAGACAAGT
ATTCAGCAAAATTAGATCCTCTATTTTTCTATAATAATAAAATTTTAGTACTATCAAAACAAAAAGATTTTGATGCAGCC
TATGAACTTTCCATAGAGGCAATAAAAAAGCTTAAAGAACCTAACTATGAACTATACAATAATATTTCATTTGTATATTA
CAATCTAAAACTTTACCATAGAGCCATAGATTTTTCAGAAAAAGCCTTAAAATTAAATCCTATAGATACCTTTGCTTTAA
ACAATAAAGGCTTCTCTTATATTGAAATAGGGGAATATTCTAAAGCTGAGGAATCCTTTGATAAAACATTAGAATTTAAT
CCTTATTTTAAAAATGCCTTATCTGGAAAGGCATATTGCGCTTTTGAAAAGGGTGATTATCTTCTTGCCACTAAATATCT
TCAATATTTTGTTTCAATTGAAAAAAATAATGCCTTTGCCTATAAAAAATTAGGAGAATGTTACTTTCTTTTAAATGACT
TAAAAAACAGTTCTAAAATGTATGAGAAATCCTTAGAAATAGACCAAGAAAATGATGCTTCTTATTGTGAATATGCAAAT
GTACTTCTTTGCTTAGGTCACTATGATAAGGCACTAAACAACTTAAACAAGGCCCTTGCCATATCACCCTATAACTTTAT
GGCCTTTTATTATAAAGCACGAGCTTATTCATTAAAAAAAGATTTTGATAATGCCTTTTATTATTTAGAAAGAGCCTTTA
ACTATTGTGACTCCTTAAAAGAAATAGCTCTTAAGGATGAAATGCTTACAAACTTAAAGTTTTTCTCAAAGTTTAGTGAG
TTATTAGAGATTCATAATATACAAAACTAA

Upstream 100 bases:

>100_bases
TGCTATCTAATTTTATTATACAGTATTCTTATTATTCATGTAATCCTTTTTAGTAATTCTTTATATAATAATAGTAGAAG
AATATTTAGGAGAGATAAAT

Downstream 100 bases:

>100_bases
CTTTTAAAGTGAAAAGTTAAAAATTATTCTAATTAATTTTTTCATAGATTTAGAATCAATCTAAAAAAACTCTTAAATCT
TAAAAATTACACCTATTAAT

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: Peptidase; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Protein; TPR Domain Containing Protein; Tetratricopeptide Repeat Domain-Containing Protein; Serine/Threonine Protein Kinase; Peptidase S; Beta-Lactamase Domain-Containing Protein; Lipoprotein

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTSFQSLIIILICILSIIIILYLIESDNFLPEKQIRKYVSLGKFKHALYLLDKYSAKLDPLFFYNNKILVLSKQKDFDAA
YELSIEAIKKLKEPNYELYNNISFVYYNLKLYHRAIDFSEKALKLNPIDTFALNNKGFSYIEIGEYSKAEESFDKTLEFN
PYFKNALSGKAYCAFEKGDYLLATKYLQYFVSIEKNNAFAYKKLGECYFLLNDLKNSSKMYEKSLEIDQENDASYCEYAN
VLLCLGHYDKALNNLNKALAISPYNFMAFYYKARAYSLKKDFDNAFYYLERAFNYCDSLKEIALKDEMLTNLKFFSKFSE
LLEIHNIQN

Sequences:

>Translated_329_residues
MTSFQSLIIILICILSIIIILYLIESDNFLPEKQIRKYVSLGKFKHALYLLDKYSAKLDPLFFYNNKILVLSKQKDFDAA
YELSIEAIKKLKEPNYELYNNISFVYYNLKLYHRAIDFSEKALKLNPIDTFALNNKGFSYIEIGEYSKAEESFDKTLEFN
PYFKNALSGKAYCAFEKGDYLLATKYLQYFVSIEKNNAFAYKKLGECYFLLNDLKNSSKMYEKSLEIDQENDASYCEYAN
VLLCLGHYDKALNNLNKALAISPYNFMAFYYKARAYSLKKDFDNAFYYLERAFNYCDSLKEIALKDEMLTNLKFFSKFSE
LLEIHNIQN
>Mature_328_residues
TSFQSLIIILICILSIIIILYLIESDNFLPEKQIRKYVSLGKFKHALYLLDKYSAKLDPLFFYNNKILVLSKQKDFDAAY
ELSIEAIKKLKEPNYELYNNISFVYYNLKLYHRAIDFSEKALKLNPIDTFALNNKGFSYIEIGEYSKAEESFDKTLEFNP
YFKNALSGKAYCAFEKGDYLLATKYLQYFVSIEKNNAFAYKKLGECYFLLNDLKNSSKMYEKSLEIDQENDASYCEYANV
LLCLGHYDKALNNLNKALAISPYNFMAFYYKARAYSLKKDFDNAFYYLERAFNYCDSLKEIALKDEMLTNLKFFSKFSEL
LEIHNIQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38676; Mature: 38545

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFQSLIIILICILSIIIILYLIESDNFLPEKQIRKYVSLGKFKHALYLLDKYSAKLDP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LFFYNNKILVLSKQKDFDAAYELSIEAIKKLKEPNYELYNNISFVYYNLKLYHRAIDFSE
EEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEEEEEEEHHHHHHCCCC
KALKLNPIDTFALNNKGFSYIEIGEYSKAEESFDKTLEFNPYFKNALSGKAYCAFEKGDY
CCEEECCCEEEEECCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHCCCCCEEEEEECCCC
LLATKYLQYFVSIEKNNAFAYKKLGECYFLLNDLKNSSKMYEKSLEIDQENDASYCEYAN
HHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHH
VLLCLGHYDKALNNLNKALAISPYNFMAFYYKARAYSLKKDFDNAFYYLERAFNYCDSLK
HHHHHHHHHHHHHHHCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIALKDEMLTNLKFFSKFSELLEIHNIQN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSFQSLIIILICILSIIIILYLIESDNFLPEKQIRKYVSLGKFKHALYLLDKYSAKLDP
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LFFYNNKILVLSKQKDFDAAYELSIEAIKKLKEPNYELYNNISFVYYNLKLYHRAIDFSE
EEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEEEEEEEHHHHHHCCCC
KALKLNPIDTFALNNKGFSYIEIGEYSKAEESFDKTLEFNPYFKNALSGKAYCAFEKGDY
CCEEECCCEEEEECCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHCCCCCEEEEEECCCC
LLATKYLQYFVSIEKNNAFAYKKLGECYFLLNDLKNSSKMYEKSLEIDQENDASYCEYAN
HHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHH
VLLCLGHYDKALNNLNKALAISPYNFMAFYYKARAYSLKKDFDNAFYYLERAFNYCDSLK
HHHHHHHHHHHHHHHCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIALKDEMLTNLKFFSKFSELLEIHNIQN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA