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The map label for this gene is ycdZ [H]

Identifier: 18310268

GI number: 18310268

Start: 1516256

End: 1516708

Strand: Direct

Name: ycdZ [H]

Synonym: CPE1286

Alternate gene names: 18310268

Gene position: 1516256-1516708 (Clockwise)

Preceding gene: 18310265

Following gene: 18310275

Centisome position: 50.02

GC content: 36.42

Gene sequence:

>453_bases
ATGGACGTACTTGTATATGTGGCTATCAGCGTTGGTGTACTATCTGGAGTTTGGGCATGGATGGCAGCAGTATTTGGAAT
GGTAAGTTGGACTGGCTTTGTTGGTTGGACTAGTTACTATTCCTCAGGTGGAATGGCTAAAGGACTTTTTAGATCTCTTT
GCTCAAATGCAACAGGCATTATTTACGCTCTGCTTATTATAAAAGGATCATCTATTTTCCCAAATGAATATTGGTCTTAT
TTTTTAACAGCCTTTTTCTCTTTTATGATGGTAATACAAGCCAAGTTTAAAAAATTCGAATTTATCTCTGGAGCATTCTG
TGGCTGCTTCTCAACCTTTGGATTAAATGGAAACTGGCAAGCTGTAATACCAGCACTACTTTGTGGAAACGTATTAGGAT
ACATATCACAAAAGATAGGAATCTACTGTCATAAAGTATTTAGTAAGATTTAA

Upstream 100 bases:

>100_bases
AATAAGTTGATTAAAGGTTTACTTTTGGATAAAATATTAAGGTACGATACAAAACATTAAGATTAAGTTTATAAGATACT
AATGAGGAGGATATTTTTCT

Downstream 100 bases:

>100_bases
ATACTATTAGATAAAAATTAATGGCAAGTACTAAAAAATAATAACTTGCCATTATCTAACTATACTATTATTAATTTTGT
AATTGCTAAAATCAATCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDVLVYVAISVGVLSGVWAWMAAVFGMVSWTGFVGWTSYYSSGGMAKGLFRSLCSNATGIIYALLIIKGSSIFPNEYWSY
FLTAFFSFMMVIQAKFKKFEFISGAFCGCFSTFGLNGNWQAVIPALLCGNVLGYISQKIGIYCHKVFSKI

Sequences:

>Translated_150_residues
MDVLVYVAISVGVLSGVWAWMAAVFGMVSWTGFVGWTSYYSSGGMAKGLFRSLCSNATGIIYALLIIKGSSIFPNEYWSY
FLTAFFSFMMVIQAKFKKFEFISGAFCGCFSTFGLNGNWQAVIPALLCGNVLGYISQKIGIYCHKVFSKI
>Mature_150_residues
MDVLVYVAISVGVLSGVWAWMAAVFGMVSWTGFVGWTSYYSSGGMAKGLFRSLCSNATGIIYALLIIKGSSIFPNEYWSY
FLTAFFSFMMVIQAKFKKFEFISGAFCGCFSTFGLNGNWQAVIPALLCGNVLGYISQKIGIYCHKVFSKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=152, Percent_Identity=37.5, Blast_Score=106, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 16519; Mature: 16519

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLVYVAISVGVLSGVWAWMAAVFGMVSWTGFVGWTSYYSSGGMAKGLFRSLCSNATGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
IYALLIIKGSSIFPNEYWSYFLTAFFSFMMVIQAKFKKFEFISGAFCGCFSTFGLNGNWQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AVIPALLCGNVLGYISQKIGIYCHKVFSKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVLVYVAISVGVLSGVWAWMAAVFGMVSWTGFVGWTSYYSSGGMAKGLFRSLCSNATGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
IYALLIIKGSSIFPNEYWSYFLTAFFSFMMVIQAKFKKFEFISGAFCGCFSTFGLNGNWQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AVIPALLCGNVLGYISQKIGIYCHKVFSKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9457880 [H]