| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310273
Identifier: 18310273
GI number: 18310273
Start: 1525991
End: 1526173
Strand: Reverse
Name: 18310273
Synonym: CPE1291
Alternate gene names: NA
Gene position: 1526173-1525991 (Counterclockwise)
Preceding gene: 18310274
Following gene: 18310272
Centisome position: 50.34
GC content: 38.8
Gene sequence:
>183_bases ATGAAGCTTACCAAAGAGAAAGTTTGTCTGTGGACGTTCTCTGAGGGAATTTTAAAACACAAGACTACACTCGTAGAAAG TCTTACTGGTCTGCTTTCGGACACGGGTTCGACACCCGTCGCCTCCACCATAAAAACCACGAAAATCATATTTTTTGATT TTTGTGGTTTTTTTATTGTTTAA
Upstream 100 bases:
>100_bases CGCTGCTCATCCTTCCTCAATTGCCCACGGTTGAGAGTAAGGGTGTCATTTAAAAGTGGGGAACCGAGCCTAGCAAAGCT TTGAGCTAGGAACGGAATTT
Downstream 100 bases:
>100_bases TGAAAATAACTTGCTATGTGAGTATGTTCACAAGACCTTTAGCGATGTAAGAAAAAACCTCCTTTTTGTTACTAAAACTG GCTGTGAGCCTATTTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MKLTKEKVCLWTFSEGILKHKTTLVESLTGLLSDTGSTPVASTIKTTKIIFFDFCGFFIV
Sequences:
>Translated_60_residues MKLTKEKVCLWTFSEGILKHKTTLVESLTGLLSDTGSTPVASTIKTTKIIFFDFCGFFIV >Mature_60_residues MKLTKEKVCLWTFSEGILKHKTTLVESLTGLLSDTGSTPVASTIKTTKIIFFDFCGFFIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6674; Mature: 6674
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTKEKVCLWTFSEGILKHKTTLVESLTGLLSDTGSTPVASTIKTTKIIFFDFCGFFIV CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLTKEKVCLWTFSEGILKHKTTLVESLTGLLSDTGSTPVASTIKTTKIIFFDFCGFFIV CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA