| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is fliB [H]
Identifier: 18310256
GI number: 18310256
Start: 1493787
End: 1494935
Strand: Reverse
Name: fliB [H]
Synonym: CPE1274
Alternate gene names: 18310256
Gene position: 1494935-1493787 (Counterclockwise)
Preceding gene: 18310257
Following gene: 18310255
Centisome position: 49.31
GC content: 23.76
Gene sequence:
>1149_bases ATGAATGAAGAAAAGATTATTAAGAAACTTTCAGGTTATGATGATTTTAAGTGTATAGCTGATAGCTGTAAATTCACTTG TTGTGAAGGATGGGATATTGATATAGATAAGGATACATATGAAAAATGGAAAAATAATAAAGAACATTCTAAATACCTTT TAAATAATGTAAAAGTGAGAGAAGTTAATGGGGAAAAATTATACTTTATAAACAAAGATACCTTTGAAGCGTGTTCTTTT TTAGATTGTAAGGGACTGTGTAATATAGTTAAGTGTAAAGGGGAAGAGTATTTATCTAAAACTTGTAGCACATTTCCAAG AATAAGTAATGAGTTTGAATATAGAAAAGAGCTTTCTTTATCATGTTCATGTCCAGAAGTTATGGAAATATTAGATAATA TAGATAGTGAGATTATAATAAATCAATTGGAAAAAATAAATAAAGAAGATATACCATTAGAGCTTAAATTGAGGGATACT TTAATAAATATAATGTATGAAGAGGGATTTTCCTTAGAAGAAAAATTACTTTTAGGTTTTGAGATGTTGTTAAATATATT AGAAAATGAAAGTTATACTAGTGAAGATATTTTCTTAGATGAACTAGAAAAGTATAGTAACATAGAGTACATAAAAGAAG TGATTTATCTATATAATGAAATAAAAATAAATAAAGGTGAATCATTAGAGGAAGTAAACTCTCTGTTTTTAGATATTATA GAAAATTATAAGAGTATTTCTAATCTAAAGTGTGTACTAGAAAGAGTATCTGATTTTGCTGAAAATACTAATATAAATCT TTTAAGTGAAAAGTGGGAGAAATATAAAGAATCATTTAAAGAATTTGAAGATTTACTTAAAAAATGTATTATATCTAAGA TATTTAGTAATTGTACAAGTGATGATATGGAAGATATGATAATTTCTTTCCAATTAATTATATTAGAATATTTATTAACA AGATATTCTGTATTTTTAAATTATTGTATTAATGATGAAAAAATACAAAGGGAAGAGATAAAGAATAATATTATTACTTT TTCAAGAGTTATTGAAAATAATAAAGATGCTGTTATAGAGTTCTTAAATGATGGCTTTGAGGAGATAATTTTAGAAATAG GTTATCTATGTTTTATAAGTTTGGTCTAA
Upstream 100 bases:
>100_bases AGTATAGTAAAAAATAGTAAATTAGAAAGTGTGCTATAATTACATTTATTAGAGTAATTAGACTTTTAACTAATATAATG AAAATATGGAGAGAAATTAT
Downstream 100 bases:
>100_bases ATTGTATTTTAAACTAAGAAGAGATTTAAAACTATGTATAAGTTTACATATATAAGTTAACAATAACTTAAAATTTTTTA TTTAAATACCATATTTAAGA
Product: lysine-N-methylase
Products: NA
Alternate protein names: Lysine N-methyltransferase [H]
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MNEEKIIKKLSGYDDFKCIADSCKFTCCEGWDIDIDKDTYEKWKNNKEHSKYLLNNVKVREVNGEKLYFINKDTFEACSF LDCKGLCNIVKCKGEEYLSKTCSTFPRISNEFEYRKELSLSCSCPEVMEILDNIDSEIIINQLEKINKEDIPLELKLRDT LINIMYEEGFSLEEKLLLGFEMLLNILENESYTSEDIFLDELEKYSNIEYIKEVIYLYNEIKINKGESLEEVNSLFLDII ENYKSISNLKCVLERVSDFAENTNINLLSEKWEKYKESFKEFEDLLKKCIISKIFSNCTSDDMEDMIISFQLIILEYLLT RYSVFLNYCINDEKIQREEIKNNIITFSRVIENNKDAVIEFLNDGFEEIILEIGYLCFISLV
Sequences:
>Translated_382_residues MNEEKIIKKLSGYDDFKCIADSCKFTCCEGWDIDIDKDTYEKWKNNKEHSKYLLNNVKVREVNGEKLYFINKDTFEACSF LDCKGLCNIVKCKGEEYLSKTCSTFPRISNEFEYRKELSLSCSCPEVMEILDNIDSEIIINQLEKINKEDIPLELKLRDT LINIMYEEGFSLEEKLLLGFEMLLNILENESYTSEDIFLDELEKYSNIEYIKEVIYLYNEIKINKGESLEEVNSLFLDII ENYKSISNLKCVLERVSDFAENTNINLLSEKWEKYKESFKEFEDLLKKCIISKIFSNCTSDDMEDMIISFQLIILEYLLT RYSVFLNYCINDEKIQREEIKNNIITFSRVIENNKDAVIEFLNDGFEEIILEIGYLCFISLV >Mature_382_residues MNEEKIIKKLSGYDDFKCIADSCKFTCCEGWDIDIDKDTYEKWKNNKEHSKYLLNNVKVREVNGEKLYFINKDTFEACSF LDCKGLCNIVKCKGEEYLSKTCSTFPRISNEFEYRKELSLSCSCPEVMEILDNIDSEIIINQLEKINKEDIPLELKLRDT LINIMYEEGFSLEEKLLLGFEMLLNILENESYTSEDIFLDELEKYSNIEYIKEVIYLYNEIKINKGESLEEVNSLFLDII ENYKSISNLKCVLERVSDFAENTNINLLSEKWEKYKESFKEFEDLLKKCIISKIFSNCTSDDMEDMIISFQLIILEYLLT RYSVFLNYCINDEKIQREEIKNNIITFSRVIENNKDAVIEFLNDGFEEIILEIGYLCFISLV
Specific function: Post-translationally modifies flagellin by methylation of epsilon amino group of surface-exposed lysine residues [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020193 - ProDom: PD035357 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45084; Mature: 45084
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEEKIIKKLSGYDDFKCIADSCKFTCCEGWDIDIDKDTYEKWKNNKEHSKYLLNNVKVR CCHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHCCEEE EVNGEKLYFINKDTFEACSFLDCKGLCNIVKCKGEEYLSKTCSTFPRISNEFEYRKELSL EECCCEEEEECCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCC SCSCPEVMEILDNIDSEIIINQLEKINKEDIPLELKLRDTLINIMYEEGFSLEEKLLLGF CCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHH EMLLNILENESYTSEDIFLDELEKYSNIEYIKEVIYLYNEIKINKGESLEEVNSLFLDII HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ENYKSISNLKCVLERVSDFAENTNINLLSEKWEKYKESFKEFEDLLKKCIISKIFSNCTS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDMEDMIISFQLIILEYLLTRYSVFLNYCINDEKIQREEIKNNIITFSRVIENNKDAVIE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH FLNDGFEEIILEIGYLCFISLV HHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNEEKIIKKLSGYDDFKCIADSCKFTCCEGWDIDIDKDTYEKWKNNKEHSKYLLNNVKVR CCHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHCCEEE EVNGEKLYFINKDTFEACSFLDCKGLCNIVKCKGEEYLSKTCSTFPRISNEFEYRKELSL EECCCEEEEECCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCC SCSCPEVMEILDNIDSEIIINQLEKINKEDIPLELKLRDTLINIMYEEGFSLEEKLLLGF CCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHH EMLLNILENESYTSEDIFLDELEKYSNIEYIKEVIYLYNEIKINKGESLEEVNSLFLDII HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ENYKSISNLKCVLERVSDFAENTNINLLSEKWEKYKESFKEFEDLLKKCIISKIFSNCTS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDMEDMIISFQLIILEYLLTRYSVFLNYCINDEKIQREEIKNNIITFSRVIENNKDAVIE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH FLNDGFEEIILEIGYLCFISLV HHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11142406 [H]