| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is adeC
Identifier: 18310250
GI number: 18310250
Start: 1487900
End: 1489618
Strand: Reverse
Name: adeC
Synonym: CPE1268
Alternate gene names: 18310250
Gene position: 1489618-1487900 (Counterclockwise)
Preceding gene: 18310251
Following gene: 18310249
Centisome position: 49.14
GC content: 28.21
Gene sequence:
>1719_bases ATGCAAGTAGAATTAATTATTAAAAATTTAAAGGTATATAATAGTTATTTTAAAAAATTCATAAAAAGTGATGTCTTAAT AAATGAGGGAAAATTTCTTCATATAGGGAAAGGATATGAAGATAGATTATGGTCTGAAAATATAATAGATGGGGAAGACA AATATATAATTCCTGGATTAATAGATATACACATGCATATAGAGAGTTCTATGACTATTCCAAGGGAATTTTCTAAGGCT GCAATAAAACATGGGGTCACTACAGTAGTAGCTGATCCTCATGAAATTGCTAATGTTTTTGGAGTAAGAGGTATAGAAGA ATTTATTAAATTTAAGGGAAATCTAGATATATTTTATGGCATACCTAGCTCAGTACCTTCAACTTCAAGTTCACTAGAGA CAACAGGGGAGAAAATAACTCACAATGAGGTAAAAAGATTATTAGAGTATGATAATATTATTTGTCTTGGAGAAGTAATG AACTTTAAAGACTTAATAGAAGATGATGATTCTAATATAAATAAAATAATAAATATAAGTAAAGAAAAAAATATACCTTT AGAAGGGCATTGTCCTAAAATACAAGGAGTAGATTTATCACTTTATATTTATAGAGGGGTTAATGGGGATCATACTCAGC AGTCAGTTGGATCCCTTCAAGAAAAAATTCAAAATGGTATGTTTATAGAGATGCAACATAAATCAATGACATTAGAGAAT ATAAAATTTTTGATTGAAAATAATTTATATGAGCATTTTGCATTAGTAACAGATGATGTAATGGCAGATAAATTAGTTAA GGGGCATCTTGATGAGATTTTAAAGGAAGCCGTAAAGCTTGGAATGTCTATAGAGAATGCAATATATGCATCTACATATA CGCCAGCTAGAAGAATGAATCTTTTAGATAGAGGAACAATTGCACCTGGAAAGCTAGCAGATTTTATATTGTTAGATAGT ATAGAAGATTTTAATATATATGAAGTTTATAAAAATGGGGAAATGGTTTTTAATAGAGATAAGGGGTTAAAAGAAGAGTT TTTTGAAGATAAAAGCAAATTAGATTATAGATTTTATAATAGTATAGAATTAAATAATATTACTAAAGAAAGTTTAGAGG TTAAAGTACCAAATAAGTATAAAAATAAAGTAAATTGTAGAACTATGAAAGTCTTAAAGAATACTACTTTTACAGAAGAG GGAGAAGTAACTTTAAATGTTTATAATAATATTTTACAATGGGAAAAGAGTAGCTGTGCATTAATTGCTGTTTTTGAGAG ATATGGTAAAAATAATAATATATCTTTTGGATTAGTAGAAGGAGAAATTATAAAAGAGGGAGCAATAGCAACTACTTGGG CTCATGATCATCATAACCTTATGGTAATGGGAAGAAATATTAGTGATATGACTATAGCGGCTAATGAGGTTATAAATTCT AGGGGAGGATATGTAGTCTCAAAAAATAATGAAGTAATTGCTAAATTAGAGTTACCAATAGGTGGAATAATCAGTGATGA ACCTATTGAAATCATAGGAGAAAAGCTAGGGGAAGTTAGAAATGCCATGAGAGATTTAGGATATAATCATATGAATGAAA TTATGTCATTTAGCACTTTATCTTTACCTGTTAGTCCTGCATTAAAGATAACAGATAAAGGGTTAATAGATGTTAAAAAA GGTAGTATTGTTTCTTTATTCAAAAAAGGTCTATATTAA
Upstream 100 bases:
>100_bases TGATAACGCTAAGGTAATTGACTTTAAGTTTGTTAATTCAGTAATGGATCAATGGGTTAATAACTGGAACAGAATAATGA ACTAGTTTGCAGGTAGTGAA
Downstream 100 bases:
>100_bases GTGATTATTGATTTTTATTTAGTTAGCTTTAACTTAATTACGCAAAGTAATATAAAAGGAAAGTAAGGGGATGTATCGTA GTAGATATAGCCTCTTATTT
Product: adenine deaminase
Products: NA
Alternate protein names: Adenase; Adenine aminase
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MQVELIIKNLKVYNSYFKKFIKSDVLINEGKFLHIGKGYEDRLWSENIIDGEDKYIIPGLIDIHMHIESSMTIPREFSKA AIKHGVTTVVADPHEIANVFGVRGIEEFIKFKGNLDIFYGIPSSVPSTSSSLETTGEKITHNEVKRLLEYDNIICLGEVM NFKDLIEDDDSNINKIINISKEKNIPLEGHCPKIQGVDLSLYIYRGVNGDHTQQSVGSLQEKIQNGMFIEMQHKSMTLEN IKFLIENNLYEHFALVTDDVMADKLVKGHLDEILKEAVKLGMSIENAIYASTYTPARRMNLLDRGTIAPGKLADFILLDS IEDFNIYEVYKNGEMVFNRDKGLKEEFFEDKSKLDYRFYNSIELNNITKESLEVKVPNKYKNKVNCRTMKVLKNTTFTEE GEVTLNVYNNILQWEKSSCALIAVFERYGKNNNISFGLVEGEIIKEGAIATTWAHDHHNLMVMGRNISDMTIAANEVINS RGGYVVSKNNEVIAKLELPIGGIISDEPIEIIGEKLGEVRNAMRDLGYNHMNEIMSFSTLSLPVSPALKITDKGLIDVKK GSIVSLFKKGLY
Sequences:
>Translated_572_residues MQVELIIKNLKVYNSYFKKFIKSDVLINEGKFLHIGKGYEDRLWSENIIDGEDKYIIPGLIDIHMHIESSMTIPREFSKA AIKHGVTTVVADPHEIANVFGVRGIEEFIKFKGNLDIFYGIPSSVPSTSSSLETTGEKITHNEVKRLLEYDNIICLGEVM NFKDLIEDDDSNINKIINISKEKNIPLEGHCPKIQGVDLSLYIYRGVNGDHTQQSVGSLQEKIQNGMFIEMQHKSMTLEN IKFLIENNLYEHFALVTDDVMADKLVKGHLDEILKEAVKLGMSIENAIYASTYTPARRMNLLDRGTIAPGKLADFILLDS IEDFNIYEVYKNGEMVFNRDKGLKEEFFEDKSKLDYRFYNSIELNNITKESLEVKVPNKYKNKVNCRTMKVLKNTTFTEE GEVTLNVYNNILQWEKSSCALIAVFERYGKNNNISFGLVEGEIIKEGAIATTWAHDHHNLMVMGRNISDMTIAANEVINS RGGYVVSKNNEVIAKLELPIGGIISDEPIEIIGEKLGEVRNAMRDLGYNHMNEIMSFSTLSLPVSPALKITDKGLIDVKK GSIVSLFKKGLY >Mature_572_residues MQVELIIKNLKVYNSYFKKFIKSDVLINEGKFLHIGKGYEDRLWSENIIDGEDKYIIPGLIDIHMHIESSMTIPREFSKA AIKHGVTTVVADPHEIANVFGVRGIEEFIKFKGNLDIFYGIPSSVPSTSSSLETTGEKITHNEVKRLLEYDNIICLGEVM NFKDLIEDDDSNINKIINISKEKNIPLEGHCPKIQGVDLSLYIYRGVNGDHTQQSVGSLQEKIQNGMFIEMQHKSMTLEN IKFLIENNLYEHFALVTDDVMADKLVKGHLDEILKEAVKLGMSIENAIYASTYTPARRMNLLDRGTIAPGKLADFILLDS IEDFNIYEVYKNGEMVFNRDKGLKEEFFEDKSKLDYRFYNSIELNNITKESLEVKVPNKYKNKVNCRTMKVLKNTTFTEE GEVTLNVYNNILQWEKSSCALIAVFERYGKNNNISFGLVEGEIIKEGAIATTWAHDHHNLMVMGRNISDMTIAANEVINS RGGYVVSKNNEVIAKLELPIGGIISDEPIEIIGEKLGEVRNAMRDLGYNHMNEIMSFSTLSLPVSPALKITDKGLIDVKK GSIVSLFKKGLY
Specific function: Unknown
COG id: COG1001
COG function: function code F; Adenine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenine deaminase family
Homologues:
Organism=Escherichia coli, GI1790098, Length=571, Percent_Identity=28.0210157618214, Blast_Score=232, Evalue=5e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ADEC_CLOPE (Q8XKX4)
Other databases:
- EMBL: BA000016 - RefSeq: NP_562184.1 - ProteinModelPortal: Q8XKX4 - GeneID: 989577 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE1268 - NMPDR: fig|195102.1.peg.1331 - HOGENOM: HBG725357 - OMA: IATTWAH - PhylomeDB: Q8XKX4 - ProtClustDB: CLSK567048 - BioCyc: CPER195102:CPE1268-MONOMER - BRENDA: 3.5.4.2 - HAMAP: MF_01518 - InterPro: IPR006679 - InterPro: IPR006680 - InterPro: IPR011059
Pfam domain/function: PF01979 Amidohydro_1; SSF51338 Metalo_hydrolase
EC number: =3.5.4.2
Molecular weight: Translated: 64764; Mature: 64764
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVELIIKNLKVYNSYFKKFIKSDVLINEGKFLHIGKGYEDRLWSENIIDGEDKYIIPGL CEEEEEHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCHHHHCCCCCCCCCCCCEEECCE IDIHMHIESSMTIPREFSKAAIKHGVTTVVADPHEIANVFGVRGIEEFIKFKGNLDIFYG EEEEEEECCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHCCCCHHHHHHHCCCEEEEEE IPSSVPSTSSSLETTGEKITHNEVKRLLEYDNIICLGEVMNFKDLIEDDDSNINKIINIS CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCEEEEHHHCCHHHHHCCCCCCCHHEEEEC KEKNIPLEGHCPKIQGVDLSLYIYRGVNGDHTQQSVGSLQEKIQNGMFIEMQHKSMTLEN CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHH IKFLIENNLYEHFALVTDDVMADKLVKGHLDEILKEAVKLGMSIENAIYASTYTPARRMN HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHH LLDRGTIAPGKLADFILLDSIEDFNIYEVYKNGEMVFNRDKGLKEEFFEDKSKLDYRFYN HHHCCCCCCCHHHHHHEECCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHCCCEEEEC SIELNNITKESLEVKVPNKYKNKVNCRTMKVLKNTTFTEEGEVTLNVYNNILQWEKSSCA EEEECCCCCCCEEEECCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCCC LIAVFERYGKNNNISFGLVEGEIIKEGAIATTWAHDHHNLMVMGRNISDMTIAANEVINS EEEEHHHHCCCCCEEEEEEECEEECCCCEEEEEECCCCEEEEEECCCCCCEEEHHHHHCC RGGYVVSKNNEVIAKLELPIGGIISDEPIEIIGEKLGEVRNAMRDLGYNHMNEIMSFSTL CCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEE SLPVSPALKITDKGLIDVKKGSIVSLFKKGLY ECCCCCCEEEECCCEEEECCCCHHHHHHHCCC >Mature Secondary Structure MQVELIIKNLKVYNSYFKKFIKSDVLINEGKFLHIGKGYEDRLWSENIIDGEDKYIIPGL CEEEEEHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCHHHHCCCCCCCCCCCCEEECCE IDIHMHIESSMTIPREFSKAAIKHGVTTVVADPHEIANVFGVRGIEEFIKFKGNLDIFYG EEEEEEECCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHCCCCHHHHHHHCCCEEEEEE IPSSVPSTSSSLETTGEKITHNEVKRLLEYDNIICLGEVMNFKDLIEDDDSNINKIINIS CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCEEEEHHHCCHHHHHCCCCCCCHHEEEEC KEKNIPLEGHCPKIQGVDLSLYIYRGVNGDHTQQSVGSLQEKIQNGMFIEMQHKSMTLEN CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHH IKFLIENNLYEHFALVTDDVMADKLVKGHLDEILKEAVKLGMSIENAIYASTYTPARRMN HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHH LLDRGTIAPGKLADFILLDSIEDFNIYEVYKNGEMVFNRDKGLKEEFFEDKSKLDYRFYN HHHCCCCCCCHHHHHHEECCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHCCCEEEEC SIELNNITKESLEVKVPNKYKNKVNCRTMKVLKNTTFTEEGEVTLNVYNNILQWEKSSCA EEEECCCCCCCEEEECCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCCC LIAVFERYGKNNNISFGLVEGEIIKEGAIATTWAHDHHNLMVMGRNISDMTIAANEVINS EEEEHHHHCCCCCEEEEEEECEEECCCCEEEEEECCCCEEEEEECCCCCCEEEHHHHHCC RGGYVVSKNNEVIAKLELPIGGIISDEPIEIIGEKLGEVRNAMRDLGYNHMNEIMSFSTL CCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEE SLPVSPALKITDKGLIDVKKGSIVSLFKKGLY ECCCCCCEEEECCCEEEECCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11792842