Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310222

Identifier: 18310222

GI number: 18310222

Start: 1447152

End: 1448489

Strand: Reverse

Name: 18310222

Synonym: CPE1240

Alternate gene names: NA

Gene position: 1448489-1447152 (Counterclockwise)

Preceding gene: 18310223

Following gene: 18310221

Centisome position: 47.78

GC content: 31.32

Gene sequence:

>1338_bases
ATGAATAAAAGAATAACAAAAGAAAAGCTAAAGGATATTTTAGCTAAATATCCAAGTAATAAATTTGATTCTCTAGATGA
TATACATCCAGCTGATATAGTGGATTTGTTAGAGGAGAATGAGGAAAATATTAAGCTTATAAAAAAACTTCCAGAAAATA
TGATTGCAGATATTATAGATTTTGCGAAGGATGATGACAAGGTAAATATATTAAAAAGTTTACCTGAAGAAAAGAAGAAG
AAGGTTTTAAATTTAATAGCTTCAGATGAACTTACAGACCTTATGGCAAGCTTAAATCGTGAAGAAACTAGTAAATTACT
TTCAAGTATGCCAGTTCAAGATGCTAAGGATTTAAGAAAATTATTAACATATGCACCAGATACAGCTGGTGGTGTTATGG
CCACAGAGTTTATTTCTATAAAGGATACCATGAGTGTAAAAGAAACCTTAGAGTACCTTCAATTAGAAGCTCCAAAGGCT
GAATCAGCTTATTACATATATGTTGTAGATGACTTAGGAATATTACAAGGGGTAGTTTCTTTAAGAGAACTTGTAATAAG
TAAGTTTGACGAAAAAATTTCAGAGATTGTGAATAAAAACGTCATAAGTGTTCCTTTTGATATGGACCAAGAAGAGGTTG
CAAATATATTTGATAAATATGGACTTTTAACAATACCAGTTGTTGATTACAAAGATATGCTTTTAGGTATAATAACAATT
GATGATGTTATTGAAATTATAAAAGAAGAAACAACAGAAGATATACACCGTCTAGGTGGTGTAGATGGAGAAGAAAAAGT
TGATAGTACAGTAAAAGAATCTGTAAAAAGTAGATTACCATGGTTATTTGTTAACCTAATAACTGCTTTCTTAGCTTCTG
CCACTGTTGGACTTTTTGAAGGAACTATTAGCAAGGTTGTAATTTTAGCTACATTTATGCCTATTGTTGCAGGTATGGGT
GGAAATGGAGGAACTCAAACCTTAACAATTATAGTAAGAGGTATAGCCTTAGGAGAATTAACTTTTAAAAATGCAAAGAG
AATTTTCTTTAAGGAAATTGGAGTTGGTATTTTAACAGGGGCTGCCACTGGATTAGTAACTGCAATAGTTGCTGTTTTAT
GGTCAGGAAAACCTGCAATTGGAATAGTAATAGGATTAGCTATGATATTAAATATGACTGCTGCTACCTTTGCAGGATAT
TTAGTACCAGTTGTTTTAAAGAAATTAAAAATAGATCCAGCTTTAGCTTCTGCCGTGTTTGTTACAACAGTAACTGATGT
ATGTGGATTTTTCTTCTTCTTAGGTTTAGGAACTTTATTCTTACCATATTTAACTTAG

Upstream 100 bases:

>100_bases
AATTAAAAATAAGAGGAATAGTACATTTATATACCTTTAATGAGCAAATTATCCTATAGATAGTTATTATTCCTCTTATT
TAAGGAAGAGAGGAAATGAT

Downstream 100 bases:

>100_bases
ATTATTATTTTTATTAAGAGGGTGGAATTAATGAAGAAGAGTTTTAGAAGTAAAAACATTTTATTAGTGGTAATTTTAGC
ACTTTTAGTATTTGTAGGAG

Product: magnesium transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIIDFAKDDDKVNILKSLPEEKKK
KVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRKLLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKA
ESAYYIYVVDDLGILQGVVSLRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI
DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFEGTISKVVILATFMPIVAGMG
GNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTGAATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGY
LVPVVLKKLKIDPALASAVFVTTVTDVCGFFFFLGLGTLFLPYLT

Sequences:

>Translated_445_residues
MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIIDFAKDDDKVNILKSLPEEKKK
KVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRKLLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKA
ESAYYIYVVDDLGILQGVVSLRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI
DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFEGTISKVVILATFMPIVAGMG
GNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTGAATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGY
LVPVVLKKLKIDPALASAVFVTTVTDVCGFFFFLGLGTLFLPYLT
>Mature_445_residues
MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIIDFAKDDDKVNILKSLPEEKKK
KVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRKLLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKA
ESAYYIYVVDDLGILQGVVSLRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI
DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFEGTISKVVILATFMPIVAGMG
GNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTGAATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGY
LVPVVLKKLKIDPALASAVFVTTVTDVCGFFFFLGLGTLFLPYLT

Specific function: Acts as a magnesium transporter [H]

COG id: COG2239

COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR006668
- InterPro:   IPR006667
- InterPro:   IPR006669 [H]

Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]

EC number: NA

Molecular weight: Translated: 48766; Mature: 48766

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIID
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FAKDDDKVNILKSLPEEKKKKVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRK
HHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHH
LLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKAESAYYIYVVDDLGILQGVVS
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHH
LRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI
HHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
GTISKVVILATFMPIVAGMGGNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
AATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGYLVPVVLKKLKIDPALASAVF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VTTVTDVCGFFFFLGLGTLFLPYLT
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIID
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FAKDDDKVNILKSLPEEKKKKVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRK
HHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHH
LLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKAESAYYIYVVDDLGILQGVVS
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHH
LRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI
HHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
GTISKVVILATFMPIVAGMGGNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
AATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGYLVPVVLKKLKIDPALASAVF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VTTVTDVCGFFFFLGLGTLFLPYLT
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA