| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310217
Identifier: 18310217
GI number: 18310217
Start: 1442598
End: 1443551
Strand: Reverse
Name: 18310217
Synonym: CPE1235
Alternate gene names: NA
Gene position: 1443551-1442598 (Counterclockwise)
Preceding gene: 18310218
Following gene: 18310216
Centisome position: 47.62
GC content: 27.36
Gene sequence:
>954_bases ATGGCGCAATATAAATTTATGAGAAAAAATCTTTCAAAATATAAATCTTATTTATTAACTTCAATTTATGGATTAACGTC AGAATCATCAAAGGGAGTAAAGGATTATATTAGTAAAGAGTCAACTAAGAAAAATATTGATGGAGAAGTTATAGACTTAA AGGAAAAACTAAAAAGGGGATTAGAGTTTAACAATAAGGATATTACAAATCCTAAGTTTATTCTAGAAGGGAATATAGAA TTTAGAAAAATATTAAGCATTGAAATATTAAAAAGTAATGGGTTAGAAATAGTTGTTGATAGAGAATTTCCTAATATAGT TCAATATAAAATAGGAGAGAAGATCCTTAAGGGAGCAAGAAAATCAAGGGATGAATTTTTAATAAATGGAAGTAGATTTA AACCTAAAGTAACCTCAGAAAAAATTTATGACCATATTGAAGGAGAGTATTATTTATATAGATTGAATTTTAGAAATATA AATGTAGAGATGGCAATATCTTTTAAAATAATTGATAATACAGTTAAACTTCAGTTTGAAGAAATAAATGAAAAGGGGGA GTTTAAGATTTATAAAATACAAATTCCAAATCATAATCTTATAAGCATAAATGAAGAGGAAGAAAATCTAGATATTACTA CAGCAAGAGCTCATGGAATATTAAGTTCTAATGATTACTTTTATGATTTAAGAGAAAAAGAAGTTGATCAGAATCCAGTT CATCAGACTATGGCATTTTTAGATAATGGAGGATTAGTTGCATCTTTAGAGAATAATGTCCTTGATTATGAGAAACAAGT ATATTATCAAACAACTTTAAATGAAGGGGTTAAAGAAGCAGGACTTTGGAATGGCTCATGGACATATAGGGAGCAATTAA GTGACTCAGAGGGTGGAACTTTTAGTGGAGTAACTGAATTACCTTGGTCAAGAATCGTAATTTCATATTTATAA
Upstream 100 bases:
>100_bases ACATATTATGTGAATGGTAAATTTAAAATTATACTTAGGGAGAAAAGCTGTTAAGTTTTTTATAAAAAATAACTTAAGGA CTGAAAGATAGGGGGAAATT
Downstream 100 bases:
>100_bases TAAGAAAGTTTAATAAACTATGGGAAAAACTAATTGGAGTGAAACAAGTATAGTTAGAGATATGGGATTTGATAGTTATA AATTTAAAGAAACCTTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MAQYKFMRKNLSKYKSYLLTSIYGLTSESSKGVKDYISKESTKKNIDGEVIDLKEKLKRGLEFNNKDITNPKFILEGNIE FRKILSIEILKSNGLEIVVDREFPNIVQYKIGEKILKGARKSRDEFLINGSRFKPKVTSEKIYDHIEGEYYLYRLNFRNI NVEMAISFKIIDNTVKLQFEEINEKGEFKIYKIQIPNHNLISINEEEENLDITTARAHGILSSNDYFYDLREKEVDQNPV HQTMAFLDNGGLVASLENNVLDYEKQVYYQTTLNEGVKEAGLWNGSWTYREQLSDSEGGTFSGVTELPWSRIVISYL
Sequences:
>Translated_317_residues MAQYKFMRKNLSKYKSYLLTSIYGLTSESSKGVKDYISKESTKKNIDGEVIDLKEKLKRGLEFNNKDITNPKFILEGNIE FRKILSIEILKSNGLEIVVDREFPNIVQYKIGEKILKGARKSRDEFLINGSRFKPKVTSEKIYDHIEGEYYLYRLNFRNI NVEMAISFKIIDNTVKLQFEEINEKGEFKIYKIQIPNHNLISINEEEENLDITTARAHGILSSNDYFYDLREKEVDQNPV HQTMAFLDNGGLVASLENNVLDYEKQVYYQTTLNEGVKEAGLWNGSWTYREQLSDSEGGTFSGVTELPWSRIVISYL >Mature_316_residues AQYKFMRKNLSKYKSYLLTSIYGLTSESSKGVKDYISKESTKKNIDGEVIDLKEKLKRGLEFNNKDITNPKFILEGNIEF RKILSIEILKSNGLEIVVDREFPNIVQYKIGEKILKGARKSRDEFLINGSRFKPKVTSEKIYDHIEGEYYLYRLNFRNIN VEMAISFKIIDNTVKLQFEEINEKGEFKIYKIQIPNHNLISINEEEENLDITTARAHGILSSNDYFYDLREKEVDQNPVH QTMAFLDNGGLVASLENNVLDYEKQVYYQTTLNEGVKEAGLWNGSWTYREQLSDSEGGTFSGVTELPWSRIVISYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36818; Mature: 36687
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQYKFMRKNLSKYKSYLLTSIYGLTSESSKGVKDYISKESTKKNIDGEVIDLKEKLKRG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEHHHHHHHHC LEFNNKDITNPKFILEGNIEFRKILSIEILKSNGLEIVVDREFPNIVQYKIGEKILKGAR CCCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHH KSRDEFLINGSRFKPKVTSEKIYDHIEGEYYLYRLNFRNINVEMAISFKIIDNTVKLQFE CCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEEEEEEEEEECCEEEEEEE EINEKGEFKIYKIQIPNHNLISINEEEENLDITTARAHGILSSNDYFYDLREKEVDQNPV ECCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEHHHCCEECCCCEEEECCHHCCCCCHH HQTMAFLDNGGLVASLENNVLDYEKQVYYQTTLNEGVKEAGLWNGSWTYREQLSDSEGGT HHHHHHHCCCCEEEEECCCCCCHHHHEEEEEHHHHHHHHHCCCCCCCHHHHHCCCCCCCE FSGVTELPWSRIVISYL ECCCCCCCHHHEEEECC >Mature Secondary Structure AQYKFMRKNLSKYKSYLLTSIYGLTSESSKGVKDYISKESTKKNIDGEVIDLKEKLKRG CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEHHHHHHHHC LEFNNKDITNPKFILEGNIEFRKILSIEILKSNGLEIVVDREFPNIVQYKIGEKILKGAR CCCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHH KSRDEFLINGSRFKPKVTSEKIYDHIEGEYYLYRLNFRNINVEMAISFKIIDNTVKLQFE CCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEEEEEEEEEECCEEEEEEE EINEKGEFKIYKIQIPNHNLISINEEEENLDITTARAHGILSSNDYFYDLREKEVDQNPV ECCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEHHHCCEECCCCEEEECCHHCCCCCHH HQTMAFLDNGGLVASLENNVLDYEKQVYYQTTLNEGVKEAGLWNGSWTYREQLSDSEGGT HHHHHHHCCCCEEEEECCCCCCHHHHEEEEEHHHHHHHHHCCCCCCCHHHHHCCCCCCCE FSGVTELPWSRIVISYL ECCCCCCCHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA