| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is phnC [C]
Identifier: 18310198
GI number: 18310198
Start: 1420728
End: 1420877
Strand: Reverse
Name: phnC [C]
Synonym: CPE1216
Alternate gene names: 18310198
Gene position: 1420877-1420728 (Counterclockwise)
Preceding gene: 18310199
Following gene: 18310197
Centisome position: 46.87
GC content: 27.33
Gene sequence:
>150_bases ATGATAAGATTAGAAAATCTAGAAGTTTCTATAAACAAAAGTGAAATTATAAAGGGAGTTTCATTTCATGTTAATAAGGG TGATTTTGTTGGTCTTATAGGGCCAAATGGAAGCGGAAAATCAACCATATTAAAAACTTATATAAGTTAA
Upstream 100 bases:
>100_bases ATAATATGGAACTTCCTATAGGAATAATTACCTCTGTAATAGGAGCCCCTTTCTTATTATGGCTTATGGTAAAAGGAACT AGAGAAAAGGAGTAAGGATT
Downstream 100 bases:
>100_bases TTGATAAAAAATGTGGTGCAATATACATAAATGGTAAAGAAATAGACAGTATTAGTATAAAGTCAATGGCAAGAGAATTA GCAGTAGTAAGCCAATTTAA
Product: hypothetical protein
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MIRLENLEVSINKSEIIKGVSFHVNKGDFVGLIGPNGSGKSTILKTYIS
Sequences:
>Translated_49_residues MIRLENLEVSINKSEIIKGVSFHVNKGDFVGLIGPNGSGKSTILKTYIS >Mature_49_residues MIRLENLEVSINKSEIIKGVSFHVNKGDFVGLIGPNGSGKSTILKTYIS
Specific function: Part Of The Binding-Protein-Dependent Transport System For Alkylphosphonates. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1124
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5305; Mature: 5305
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLENLEVSINKSEIIKGVSFHVNKGDFVGLIGPNGSGKSTILKTYIS CEEECCEEEEECHHHEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECC >Mature Secondary Structure MIRLENLEVSINKSEIIKGVSFHVNKGDFVGLIGPNGSGKSTILKTYIS CEEECCEEEEECHHHEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA