| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310176
Identifier: 18310176
GI number: 18310176
Start: 1391335
End: 1392597
Strand: Reverse
Name: 18310176
Synonym: CPE1194
Alternate gene names: NA
Gene position: 1392597-1391335 (Counterclockwise)
Preceding gene: 18310177
Following gene: 18310175
Centisome position: 45.94
GC content: 28.11
Gene sequence:
>1263_bases ATGGAAATAGAAAATAATAAAAATTTTGCAGTATTTACTAAAGAGATGAGAAAGACTCATACTATTTTAGCTCCTACAAT GTTGCCAATACACTTTAAACTTTTATCTGGAATAATGAAAAAGTACGGTTATAAATTAGAATTTTTTGATGGTGATACAA ACAGCGCCATTGAAGAAGGATTAAAAAGTGTTCATAATGATATATGCTATCCAGCTATGATTGTAATTGGACAACTTATG GAAGCTTTAAAAAGTGGAAAATATGACCCAGACAAAACGGCTTTAATAATGAGCCAAACTGGGGGCGGATGCCGTGCATC TAATTATATACATTTATTAAGAAAGGCACTAAAAGAAAATAACTTAGAGCAAGTTCCAGTAATTTCTTTAAATGCAAGTG GATTAGAAAAGCATGAAGGGTTTAAAATGTATCCAGGCTTATTAATAAAATGTATATATGCTCTTTATTATGGAGATCTG CTTATGTATATGTATAATCAGTGTAAATCTTATGAGATTAATAAGGGTGAAACAGATAAGGTTTTAGATAAGTGGATTGA GATTTTAAAAGAGAAGTTTGAAAGCTTAAAATATTTAAAGGTAAGAGAACTATATAAAAATATAATTTTAGATTTTTCTA AGATAGAATTAGAAGAAACTGAAAAAGTAAAGGTTGGTATAGTGGGAGAAATTTATTTAAAGTATTCTCCTTTAGGAAAT AATAATTTAGAGGAATTTTTAAGAGAAGATAATGCTGAAGTTGTTATGTCTGGTGTTACAGATTTTTTCATGTATTGTCT ATCAAATTCAGAAATAGATTATAAATTATATGGAATGAAAAAAGTTTCAAGTAAATTCACTAAAATTGGATGTTCATATT TAGAGCATTTACAAAATGTTATGATAGATTCAATAAAAAAATATAGTAATTTTAGAGCACCTGCGCCATTTAAGGAATTA AAAACTTCTGTTGAAGAGTACATAGGAAGAGGAGTTAAAATGGGTGAAGGATGGCTTATGACTGCTGAAATGTTAGAACT TATAAATAGTGGTGTAAATAATATAGTTTGTGCTCAACCCTTTGGATGTCTTCCTAATCACATAGTTGGAAAAGGTATGA TTAGAGGAATTATGGAGAAACATCCAGAAGCTAATATAGTTGTTGTAGATTATGATCCATCTTCAACAAAGGTAAATCAA GAAAATAGAATAAAATTAATGTTAGCTAATGCTAAATTAAGTGAATATATATTAAATAACTAA
Upstream 100 bases:
>100_bases TATATACTCAATTAAAAATAGATGAAACTAATAATTTAGGCGCAGCTAAAATAAGGATAAGAAGCTTGCTAGAGGCTATA GCACAGGAATAGGTGATAGA
Downstream 100 bases:
>100_bases TAAATATAAGGTCTCAAATAAGGAATTGTTTTTTTATTTGAGACCTTAATCTTTAATATCTTAATTTTGTAAAGAGTTTT TATTTAAAAATTTAGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: BadF/BadG/BcrA/BcrD ATPase Family Protein; CoA Activase; CoA-Substrate-Specific Activase Domain Protein; CoA-Substrate-Specific Activase Domain-Containing Protein; Activator Of 2-Hydroxyglutaryl-CoA Dehydratase; 2-Hydroxyglutaryl-CoA Dehydratase Activator; Activator Of-2-Hydroxyglutaryl-CoA Dehydratase; BadF/BadG/BcrA/BcrD ATPase; Activator Of -2-Hydroxyglutaryl-CoA Dehydratase; (R)-2-Hydroxyglutaryl-CoA Dehydratase Activator; (R)-2-Hydroxyglutaryl-CoA Dehydratase Activator Protein; CoA- Activase
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEGLKSVHNDICYPAMIVIGQLM EALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKENNLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDL LMYMYNQCKSYEINKGETDKVLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNVMIDSIKKYSNFRAPAPFKEL KTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQPFGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQ ENRIKLMLANAKLSEYILNN
Sequences:
>Translated_420_residues MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEGLKSVHNDICYPAMIVIGQLM EALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKENNLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDL LMYMYNQCKSYEINKGETDKVLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNVMIDSIKKYSNFRAPAPFKEL KTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQPFGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQ ENRIKLMLANAKLSEYILNN >Mature_420_residues MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEGLKSVHNDICYPAMIVIGQLM EALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKENNLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDL LMYMYNQCKSYEINKGETDKVLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNVMIDSIKKYSNFRAPAPFKEL KTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQPFGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQ ENRIKLMLANAKLSEYILNN
Specific function: Unknown
COG id: COG3581
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47940; Mature: 47940
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEG CCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH LKSVHNDICYPAMIVIGQLMEALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKEN HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC NLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDLLMYMYNQCKSYEINKGETDK CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH VLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEEEEEEEEEECCCCC NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNV CCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH MIDSIKKYSNFRAPAPFKELKTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQP HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCEEECCC FGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQENRIKLMLANAKLSEYILNN CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCC >Mature Secondary Structure MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEG CCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH LKSVHNDICYPAMIVIGQLMEALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKEN HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC NLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDLLMYMYNQCKSYEINKGETDK CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH VLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEEEEEEEEEECCCCC NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNV CCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH MIDSIKKYSNFRAPAPFKELKTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQP HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCEEECCC FGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQENRIKLMLANAKLSEYILNN CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA