| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310166
Identifier: 18310166
GI number: 18310166
Start: 1379716
End: 1380495
Strand: Reverse
Name: 18310166
Synonym: CPE1184
Alternate gene names: NA
Gene position: 1380495-1379716 (Counterclockwise)
Preceding gene: 18310167
Following gene: 18310165
Centisome position: 45.54
GC content: 31.67
Gene sequence:
>780_bases ATGAAAGAAGTTCAAAAATATTTAGAGAGCAGAATTGGTTCGTATAGCTTTTTCTTTGAGGATTTAAAGAGTGGTTATAC TTATGGTTATAATGAAAACGTTAAAATGATTTCAGCAGGTTGTATGAAATTACCTATAGCTATAGCTCTTATAAAAGAAG TAGAGGAAGGCAAAATAGACTTTTTGGATAAAGTTAAAATAGAAAGTTCAGATAAGGTCTATGGAACTGGTATAATACAT GAGTTTGGAGAGAGGGATTATACTGTATTTGAACTTATGGTAGCAATGCTAATTCAAAGTGATAATACAGCAGCAAATAA AATAATTGATTTAGTTGGTATGGATAAAATAAATGAAACTATTAAGGAATTTGGTATGAAAAATACTGAGCTTAATAGAA AAACTGCCGATGAAAGAAATTTCAAATCAGATGTAGAAAATTATACAACAGCTTATGATTTAACTTTAGCCTGGAAAAAA CTTAGTGAGGGTTCTTTCTTAAGTAAAGAAAACTCCCAAATGCTTATAGATATACTTACAAGACAACAGATTAAAAACAA ACTAGCTTTATATATACCAGACAATCTTAAGTTTGATATATCAAGCAAAACTGGAGACAAAAAGGGAGTTGAGAATGATA CGGCCTTAATTCATACTCAAAAAGGGAACTTTGCTTGTACAGTAATGTCTAGTGGAATTCCTAACTCAGTCTACGGGACT GTGACCTTGGCAAAGTCTGGTAAAATGACTTGGGACGCCATCATGAACAATTGGCACTAA
Upstream 100 bases:
>100_bases AAAAAATTTACAATTAATACTTCAAAATTTTCTGAAAATATGGTACACTTTAAACAAGGCAACAATAAAAGCAACATTAA AAGAAAGCTGGTGGGTATTT
Downstream 100 bases:
>100_bases TATTTAATGTATTTTATAAAACCTTAATAATAGAACTTACAAATAATATGGAGAGAATATATAATTATTCTAAGATTTAA ATTCTTATAAGAATTTAATT
Product: beta-lactamase
Products: substituted beta-amino acid
Alternate protein names: Beta-Lactamase Class A-Like Protein; Beta-Lactamase Protein; Beta-Lactamase Class A; NLP/P60 Protein; Peptidase
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKIDFLDKVKIESSDKVYGTGIIH EFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINETIKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKK LSEGSFLSKENSQMLIDILTRQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT VTLAKSGKMTWDAIMNNWH
Sequences:
>Translated_259_residues MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKIDFLDKVKIESSDKVYGTGIIH EFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINETIKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKK LSEGSFLSKENSQMLIDILTRQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT VTLAKSGKMTWDAIMNNWH >Mature_259_residues MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKIDFLDKVKIESSDKVYGTGIIH EFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINETIKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKK LSEGSFLSKENSQMLIDILTRQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT VTLAKSGKMTWDAIMNNWH
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6
Molecular weight: Translated: 29312; Mature: 29312
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKID CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCC FLDKVKIESSDKVYGTGIIHEFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINET CHHEEEECCCCCEEECHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH IKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKKLSEGSFLSKENSQMLIDILT HHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCCCCCCHHHHHHHH RQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT HHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEE VTLAKSGKMTWDAIMNNWH EEEECCCCEEHHHHHCCCC >Mature Secondary Structure MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKID CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCC FLDKVKIESSDKVYGTGIIHEFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINET CHHEEEECCCCCEEECHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH IKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKKLSEGSFLSKENSQMLIDILT HHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCCCCCCHHHHHHHH RQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT HHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEE VTLAKSGKMTWDAIMNNWH EEEECCCCEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA