Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310060

Identifier: 18310060

GI number: 18310060

Start: 1282959

End: 1283180

Strand: Direct

Name: 18310060

Synonym: CPE1078

Alternate gene names: NA

Gene position: 1282959-1283180 (Clockwise)

Preceding gene: 18310058

Following gene: 18310062

Centisome position: 42.32

GC content: 40.09

Gene sequence:

>222_bases
ATGTCAAGAAAATGTTGTTGCTCATGCAATTCTTGTAGAAGAAATTCCTGTGGATGCAGATGTGGAAATAATTGCTGTGG
ATTCAATAATTGTGGCGGTTTTGGAAACTGTGGTGGATTCAACAATTGCGGAGGATTTGGTAATTGTGGAGGATTTCCTT
TACTTTGGCTTCTTCTATTAGGCTGTGGCGGTTTTGGAAACTGTGGCGGAAACTGGTTTTAA

Upstream 100 bases:

>100_bases
TTTATATTATAAGTATAACTCAATTTGTTACAAAAAGTAATTAACAATTTGTGATTTCTTGAATATACTGTACTATACAA
AAGAAACGAGGTGGAATATT

Downstream 100 bases:

>100_bases
TTAATATCTAATTTTAAATATAGATTAGTTTTATAAGATAGGAGGTTTTCTCCTATCTTATAATTTTTCATAAGTTTCTT
TTAGTAATAAGGCATCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MSRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLLGCGGFGNCGGNWF

Sequences:

>Translated_73_residues
MSRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLLGCGGFGNCGGNWF
>Mature_72_residues
SRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLLGCGGFGNCGGNWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7533; Mature: 7401

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

21.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
23.3 %Cys+Met (Translated Protein)
22.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
22.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
GCGGFGNCGGNWF
HCCCCCCCCCCCC
>Mature Secondary Structure 
SRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
GCGGFGNCGGNWF
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA