| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310060
Identifier: 18310060
GI number: 18310060
Start: 1282959
End: 1283180
Strand: Direct
Name: 18310060
Synonym: CPE1078
Alternate gene names: NA
Gene position: 1282959-1283180 (Clockwise)
Preceding gene: 18310058
Following gene: 18310062
Centisome position: 42.32
GC content: 40.09
Gene sequence:
>222_bases ATGTCAAGAAAATGTTGTTGCTCATGCAATTCTTGTAGAAGAAATTCCTGTGGATGCAGATGTGGAAATAATTGCTGTGG ATTCAATAATTGTGGCGGTTTTGGAAACTGTGGTGGATTCAACAATTGCGGAGGATTTGGTAATTGTGGAGGATTTCCTT TACTTTGGCTTCTTCTATTAGGCTGTGGCGGTTTTGGAAACTGTGGCGGAAACTGGTTTTAA
Upstream 100 bases:
>100_bases TTTATATTATAAGTATAACTCAATTTGTTACAAAAAGTAATTAACAATTTGTGATTTCTTGAATATACTGTACTATACAA AAGAAACGAGGTGGAATATT
Downstream 100 bases:
>100_bases TTAATATCTAATTTTAAATATAGATTAGTTTTATAAGATAGGAGGTTTTCTCCTATCTTATAATTTTTCATAAGTTTCTT TTAGTAATAAGGCATCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MSRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLLGCGGFGNCGGNWF
Sequences:
>Translated_73_residues MSRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLLGCGGFGNCGGNWF >Mature_72_residues SRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLLGCGGFGNCGGNWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7533; Mature: 7401
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
21.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 23.3 %Cys+Met (Translated Protein) 22.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 22.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GCGGFGNCGGNWF HCCCCCCCCCCCC >Mature Secondary Structure SRKCCCSCNSCRRNSCGCRCGNNCCGFNNCGGFGNCGGFNNCGGFGNCGGFPLLWLLLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GCGGFGNCGGNWF HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA