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The map label for this gene is yvrB [H]

Identifier: 18310024

GI number: 18310024

Start: 1243122

End: 1244153

Strand: Direct

Name: yvrB [H]

Synonym: CPE1042

Alternate gene names: 18310024

Gene position: 1243122-1244153 (Clockwise)

Preceding gene: 18310023

Following gene: 18310025

Centisome position: 41.01

GC content: 32.36

Gene sequence:

>1032_bases
ATGCAGGAATCTAAAAAAAGAAAACTACTAATATTACTAGCTATTCCATTAGTAATATTAGTACTCTGTATTGGAACTTC
CATAGGAAGTTCCAATATTAATATATGGGATACTATTTCTATAGTTGGGAATAAAATTTTTAATATTCCTCTTAGAACTG
GTATAAAACCAGAGGACGTAGCAATTATTTGGGTAATTAGATTACCAAGGGTATTATTAGCTTTTGGAGTTGGAGCTTCT
CTTGCAGTTAGTGGAGCCATAATTCAATCTATATTAAAGAATCCATTAGCATCACCATATACTCTAGGAGTTTCATCAGG
AGCTTCCCTAGGAGTTGGAATATACATAGTTCTTGGAATTTCAATTCCTGTAATAGGAAATTTAGCTATGCCTATTATAG
GATTTTTATGTGGAGTTTTAACTGTTTTTGCTGTTATTATCTTTTCTAATAAAGTTGATAGAGGGCTTTCAAATAATACA
GTAATATTAGCTGGTATGGTGTTATCACTTTTTACTAGTGCAATGTTAACAACTGTAACATCTATATGCAGTGAAGATTT
AAAGGCTATTACAATGTGGCAAATGGGATCATTTGCTATGAAGAGTTGGTCATATGTTTTGGCTGGAATTCCATTTTTAA
TAATTGGAATTTTTATGGCTGTAAGATATACAAGGGAAATGGACATCTTAAGCTTTGGAGAAGATGGAGCAAAGGCAATA
GGAGTTGAAACTAAAAAGGTGAAAAAGACACTACTTGTTTCAGTGGCAATTTTAACTGGAAGTGCCGTAGCTTTAAGTGG
TGTTATAGGATTTATTGATCTTATTACTCCTCATATAGTTAGAAAAATATTTGGAGCTAGTCATAAGATAGTAATTCCAA
TGTGTATTATACTTGGAGGAACTTTAATGGTATTAACAGATTTAGTTTCAAGGACATTAATTGCCCCATCAGAATTACCA
GTTGGAGCAATTACGGCATTAATTGGAGCACCATTTTTTGCATATCTATACTTTGGAAAAAGAAGTAGGTGA

Upstream 100 bases:

>100_bases
AATAAAATATTCTTAGTAGACAATAATGCATCATCACGTGGAAGTCAATACGTGGTAAATGTATTAAAACAAATGGCAAA
GGATATTTATCCAGAACAAT

Downstream 100 bases:

>100_bases
TATTTTGCTAGAAGTTAAAAATTTATGTTGTGGATATGATGGTAATGAGGTTATACATAATTTATCTTTTAACATAAACA
GAGGAGAAAACATATCTATA

Product: iron ABC transporter

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MQESKKRKLLILLAIPLVILVLCIGTSIGSSNINIWDTISIVGNKIFNIPLRTGIKPEDVAIIWVIRLPRVLLAFGVGAS
LAVSGAIIQSILKNPLASPYTLGVSSGASLGVGIYIVLGISIPVIGNLAMPIIGFLCGVLTVFAVIIFSNKVDRGLSNNT
VILAGMVLSLFTSAMLTTVTSICSEDLKAITMWQMGSFAMKSWSYVLAGIPFLIIGIFMAVRYTREMDILSFGEDGAKAI
GVETKKVKKTLLVSVAILTGSAVALSGVIGFIDLITPHIVRKIFGASHKIVIPMCIILGGTLMVLTDLVSRTLIAPSELP
VGAITALIGAPFFAYLYFGKRSR

Sequences:

>Translated_343_residues
MQESKKRKLLILLAIPLVILVLCIGTSIGSSNINIWDTISIVGNKIFNIPLRTGIKPEDVAIIWVIRLPRVLLAFGVGAS
LAVSGAIIQSILKNPLASPYTLGVSSGASLGVGIYIVLGISIPVIGNLAMPIIGFLCGVLTVFAVIIFSNKVDRGLSNNT
VILAGMVLSLFTSAMLTTVTSICSEDLKAITMWQMGSFAMKSWSYVLAGIPFLIIGIFMAVRYTREMDILSFGEDGAKAI
GVETKKVKKTLLVSVAILTGSAVALSGVIGFIDLITPHIVRKIFGASHKIVIPMCIILGGTLMVLTDLVSRTLIAPSELP
VGAITALIGAPFFAYLYFGKRSR
>Mature_343_residues
MQESKKRKLLILLAIPLVILVLCIGTSIGSSNINIWDTISIVGNKIFNIPLRTGIKPEDVAIIWVIRLPRVLLAFGVGAS
LAVSGAIIQSILKNPLASPYTLGVSSGASLGVGIYIVLGISIPVIGNLAMPIIGFLCGVLTVFAVIIFSNKVDRGLSNNT
VILAGMVLSLFTSAMLTTVTSICSEDLKAITMWQMGSFAMKSWSYVLAGIPFLIIGIFMAVRYTREMDILSFGEDGAKAI
GVETKKVKKTLLVSVAILTGSAVALSGVIGFIDLITPHIVRKIFGASHKIVIPMCIILGGTLMVLTDLVSRTLIAPSELP
VGAITALIGAPFFAYLYFGKRSR

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=284, Percent_Identity=34.1549295774648, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=35.4385964912281, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1790741, Length=289, Percent_Identity=32.1799307958478, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1786805, Length=291, Percent_Identity=31.6151202749141, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786347, Length=283, Percent_Identity=31.8021201413428, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1786804, Length=284, Percent_Identity=31.6901408450704, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36422; Mature: 36422

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQESKKRKLLILLAIPLVILVLCIGTSIGSSNINIWDTISIVGNKIFNIPLRTGIKPEDV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHEECHHHCCCCCCCE
AIIWVIRLPRVLLAFGVGASLAVSGAIIQSILKNPLASPYTLGVSSGASLGVGIYIVLGI
EEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHEECC
SIPVIGNLAMPIIGFLCGVLTVFAVIIFSNKVDRGLSNNTVILAGMVLSLFTSAMLTTVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHH
SICSEDLKAITMWQMGSFAMKSWSYVLAGIPFLIIGIFMAVRYTREMDILSFGEDGAKAI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEE
GVETKKVKKTLLVSVAILTGSAVALSGVIGFIDLITPHIVRKIFGASHKIVIPMCIILGG
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
TLMVLTDLVSRTLIAPSELPVGAITALIGAPFFAYLYFGKRSR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQESKKRKLLILLAIPLVILVLCIGTSIGSSNINIWDTISIVGNKIFNIPLRTGIKPEDV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHEECHHHCCCCCCCE
AIIWVIRLPRVLLAFGVGASLAVSGAIIQSILKNPLASPYTLGVSSGASLGVGIYIVLGI
EEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHEECC
SIPVIGNLAMPIIGFLCGVLTVFAVIIFSNKVDRGLSNNTVILAGMVLSLFTSAMLTTVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHH
SICSEDLKAITMWQMGSFAMKSWSYVLAGIPFLIIGIFMAVRYTREMDILSFGEDGAKAI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEE
GVETKKVKKTLLVSVAILTGSAVALSGVIGFIDLITPHIVRKIFGASHKIVIPMCIILGG
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
TLMVLTDLVSRTLIAPSELPVGAITALIGAPFFAYLYFGKRSR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]