Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310019

Identifier: 18310019

GI number: 18310019

Start: 1238604

End: 1238984

Strand: Direct

Name: 18310019

Synonym: CPE1037

Alternate gene names: NA

Gene position: 1238604-1238984 (Clockwise)

Preceding gene: 18310018

Following gene: 18310020

Centisome position: 40.86

GC content: 26.77

Gene sequence:

>381_bases
TTGAAACTTTTATTTGGCGGTGCCTATAATGGAAAACTAAGGTATGTAAGAGAAAAGTTAGGCATAAATGAAGAGGAAAT
ATTTTATTGCAAAGAAGATTCTATAGACTTTTCTAAAAAGGTTATTAGTGGAATAGATAGATTAATTTATTTTAATGCCT
TACAAGGAAAAGAGTCTTTAAGCTTTTTTAAGGAAAAAAAAGAATTATTAAAAGATAAAATTTTAATTTGTGATGAAATA
TCTTCAGGAATAGTTCCTTTAAAGAAAGAGGAAAGATTATGGAGAGAAGAGACTGGAAAAGTTCTTCAGTTTTTATCAAA
GGAAAGTGAAGAAGTTTATAGAATATTTTTTGGAATAGGAACAAGATTAAAGGGTGAATAA

Upstream 100 bases:

>100_bases
GAATTAGGAGGAATAAATGGAGACGTTGCAGGATATATTCTTGTTCTTATGGAATTTACAGGGATTTTACTTTTAGGAAT
TATTTAAGGAGGAGAAGCTT

Downstream 100 bases:

>100_bases
TAAGATGATAATTTATTTAATTAGACATGGGAAGACTTATTGCAATGAGAATAAACTTTATTGTGGAATAAGTGATGTGC
CTTTAAGTGAGGAAGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKLLFGGAYNGKLRYVREKLGINEEEIFYCKEDSIDFSKKVISGIDRLIYFNALQGKESLSFFKEKKELLKDKILICDEI
SSGIVPLKKEERLWREETGKVLQFLSKESEEVYRIFFGIGTRLKGE

Sequences:

>Translated_126_residues
MKLLFGGAYNGKLRYVREKLGINEEEIFYCKEDSIDFSKKVISGIDRLIYFNALQGKESLSFFKEKKELLKDKILICDEI
SSGIVPLKKEERLWREETGKVLQFLSKESEEVYRIFFGIGTRLKGE
>Mature_126_residues
MKLLFGGAYNGKLRYVREKLGINEEEIFYCKEDSIDFSKKVISGIDRLIYFNALQGKESLSFFKEKKELLKDKILICDEI
SSGIVPLKKEERLWREETGKVLQFLSKESEEVYRIFFGIGTRLKGE

Specific function: Unknown

COG id: COG2087

COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14727; Mature: 14727

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLFGGAYNGKLRYVREKLGINEEEIFYCKEDSIDFSKKVISGIDRLIYFNALQGKESL
CEEEECCCCCCHHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
SFFKEKKELLKDKILICDEISSGIVPLKKEERLWREETGKVLQFLSKESEEVYRIFFGIG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
TRLKGE
CCCCCC
>Mature Secondary Structure
MKLLFGGAYNGKLRYVREKLGINEEEIFYCKEDSIDFSKKVISGIDRLIYFNALQGKESL
CEEEECCCCCCHHHHHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
SFFKEKKELLKDKILICDEISSGIVPLKKEERLWREETGKVLQFLSKESEEVYRIFFGIG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
TRLKGE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA