| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is pabB [H]
Identifier: 18309999
GI number: 18309999
Start: 1220406
End: 1221752
Strand: Direct
Name: pabB [H]
Synonym: CPE1017
Alternate gene names: 18309999
Gene position: 1220406-1221752 (Clockwise)
Preceding gene: 18309998
Following gene: 18310000
Centisome position: 40.26
GC content: 27.32
Gene sequence:
>1347_bases TTGAATTTTGAAATTAAGGAAATAGAAAATAAGCTTAAGCCACATGAAGTATATTTTTTATTTAAAGATGAAATAAACAG TATATTTTTAGATAGTTCAAAGGAAGATAGCGAATTTTCTTTATATTCATTCATAGGATTAAATCCTTTTAAAAAGTTTA TCTCTAAGGGAAATGAGATTTTTATAGATGAAAAACTAGTCTTAGGAGATCCTTTTAAAAAATTAGAAGAGCTTATTTTA GAATATAAAATAAATTATAATAGTGAGATACCTTTTTTAGGAGGTGCTATGGGATATTTTTCTTATGATATAGGAAGAGT TATTGAAGATATGCCTAAAAGTGCTAAGGATGATGTGTGTATTCCAGATAGTTATTTTTTATTTTATGATAATGTAATAA TATTTGATTTGAGAAATCAAAAAACATATATAACAGCCCTAGGAATTAAGGAAGAGTCAGAAAAAAGTATAGCTAATATT TATGAGAGGATAAAAGATAAGGATATAAATTTAAATATCAGCTTAGATAAAAATACTGAGTTTAGTTCAAATTTTTCAAG AGAAGAATACATAAATTCAGTAAAAAAGGTTAAAGAGTACATAAAAGAAGGGCATACATATATTGCAAACCTAACACAGA GATTTTCCTGTGATTTTAATTCTGATCCTTTTGATACATATATAAGTTTGAGAAGTATAAATAAAGCCCCTTTTTCCTGT TATTTAAATTTAGATGGTTTTCAAATTATAAGTTCTTCTCCAGAGAGGTTTTTAAAAGTGTTTAATAATAAGGTTGAAAC AAGACCAATTAAAGGCACAAGACCAAGAGGAAAAGATAAATTAGAAGATGAAAAGAATAAAAAAGAACTTTTAAATAGTG AAAAGGATAAGTCAGAGCTTTTAATGATTGTTGATTTAGAGAGAAATGATTTAAGTAAGGTATGCAAACCTTTTTCTGTG AAGGTTACAGAATTATTTAAATTAGAGGAATATGCTACAGTATTTCACTTAGTTTCCACAGTTATAGGAGAACTAAAGGA AGATGTTAGTTCTGTAAAATGTATAAGAGAATGTTTTCCAGGAGGTTCTATAACAGGCGCTCCTAAAATAAGAAGTATGG AGATAATAGAGGAACTAGAAGGCATTAGAAGAGGGATATATACTGGGTCCATAGGTTATTTTGATTTAAGAGGAAATTGT GATTTTAATATAGTAATAAGAACTATATTAGCAAAAGATAATAAGGCTTATTTTGGAGTAGGTGGAGGCATAACTATTGA ATCAGAAGAAGAGATGGAATATGAGGAAACTTTAGATAAGGCAAAGGCTTTAATGAGAGTATTATAA
Upstream 100 bases:
>100_bases AGTTTCATCCAGAGGCTGTTTTAACTGAATATGGCCATGAAATGCTTAAAAATTTTATTGATAATGCTAGGAAATTTAAT ATTATAGAAAGGTGAGTAAT
Downstream 100 bases:
>100_bases TTAGGTTGTGATATAAAGTGATTTATATAGGAGAAAATAAAAGAGGTTATAGTATGGTTAAGAAAGATTTACTTATCATA GATTCTTCTGTTTTTTTTGG
Product: para-aminobenzoate synthase, component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MNFEIKEIENKLKPHEVYFLFKDEINSIFLDSSKEDSEFSLYSFIGLNPFKKFISKGNEIFIDEKLVLGDPFKKLEELIL EYKINYNSEIPFLGGAMGYFSYDIGRVIEDMPKSAKDDVCIPDSYFLFYDNVIIFDLRNQKTYITALGIKEESEKSIANI YERIKDKDINLNISLDKNTEFSSNFSREEYINSVKKVKEYIKEGHTYIANLTQRFSCDFNSDPFDTYISLRSINKAPFSC YLNLDGFQIISSSPERFLKVFNNKVETRPIKGTRPRGKDKLEDEKNKKELLNSEKDKSELLMIVDLERNDLSKVCKPFSV KVTELFKLEEYATVFHLVSTVIGELKEDVSSVKCIRECFPGGSITGAPKIRSMEIIEELEGIRRGIYTGSIGYFDLRGNC DFNIVIRTILAKDNKAYFGVGGGITIESEEEMEYEETLDKAKALMRVL
Sequences:
>Translated_448_residues MNFEIKEIENKLKPHEVYFLFKDEINSIFLDSSKEDSEFSLYSFIGLNPFKKFISKGNEIFIDEKLVLGDPFKKLEELIL EYKINYNSEIPFLGGAMGYFSYDIGRVIEDMPKSAKDDVCIPDSYFLFYDNVIIFDLRNQKTYITALGIKEESEKSIANI YERIKDKDINLNISLDKNTEFSSNFSREEYINSVKKVKEYIKEGHTYIANLTQRFSCDFNSDPFDTYISLRSINKAPFSC YLNLDGFQIISSSPERFLKVFNNKVETRPIKGTRPRGKDKLEDEKNKKELLNSEKDKSELLMIVDLERNDLSKVCKPFSV KVTELFKLEEYATVFHLVSTVIGELKEDVSSVKCIRECFPGGSITGAPKIRSMEIIEELEGIRRGIYTGSIGYFDLRGNC DFNIVIRTILAKDNKAYFGVGGGITIESEEEMEYEETLDKAKALMRVL >Mature_448_residues MNFEIKEIENKLKPHEVYFLFKDEINSIFLDSSKEDSEFSLYSFIGLNPFKKFISKGNEIFIDEKLVLGDPFKKLEELIL EYKINYNSEIPFLGGAMGYFSYDIGRVIEDMPKSAKDDVCIPDSYFLFYDNVIIFDLRNQKTYITALGIKEESEKSIANI YERIKDKDINLNISLDKNTEFSSNFSREEYINSVKKVKEYIKEGHTYIANLTQRFSCDFNSDPFDTYISLRSINKAPFSC YLNLDGFQIISSSPERFLKVFNNKVETRPIKGTRPRGKDKLEDEKNKKELLNSEKDKSELLMIVDLERNDLSKVCKPFSV KVTELFKLEEYATVFHLVSTVIGELKEDVSSVKCIRECFPGGSITGAPKIRSMEIIEELEGIRRGIYTGSIGYFDLRGNC DFNIVIRTILAKDNKAYFGVGGGITIESEEEMEYEETLDKAKALMRVL
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=428, Percent_Identity=37.8504672897196, Blast_Score=318, Evalue=3e-88, Organism=Escherichia coli, GI1787518, Length=365, Percent_Identity=33.6986301369863, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI1786809, Length=416, Percent_Identity=22.3557692307692, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI87082077, Length=219, Percent_Identity=24.2009132420091, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=462, Percent_Identity=36.3636363636364, Blast_Score=256, Evalue=8e-69, Organism=Saccharomyces cerevisiae, GI6324361, Length=401, Percent_Identity=28.1795511221945, Blast_Score=154, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 51670; Mature: 51670
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEIKEIENKLKPHEVYFLFKDEINSIFLDSSKEDSEFSLYSFIGLNPFKKFISKGNEI CCCCHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCCEEEEHHHCCCHHHHHHHCCCEE FIDEKLVLGDPFKKLEELILEYKINYNSEIPFLGGAMGYFSYDIGRVIEDMPKSAKDDVC EEECEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE IPDSYFLFYDNVIIFDLRNQKTYITALGIKEESEKSIANIYERIKDKDINLNISLDKNTE CCCCEEEEECCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC FSSNFSREEYINSVKKVKEYIKEGHTYIANLTQRFSCDFNSDPFDTYISLRSINKAPFSC CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCEEE YLNLDGFQIISSSPERFLKVFNNKVETRPIKGTRPRGKDKLEDEKNKKELLNSEKDKSEL EEECCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE LMIVDLERNDLSKVCKPFSVKVTELFKLEEYATVFHLVSTVIGELKEDVSSVKCIRECFP EEEEECCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGSITGAPKIRSMEIIEELEGIRRGIYTGSIGYFDLRGNCDFNIVIRTILAKDNKAYFGV CCCCCCCCCCHHHHHHHHHHHHHHCCEECCCEEEEECCCCCHHEEEEEEHHCCCCEEEEC GGGITIESEEEMEYEETLDKAKALMRVL CCCEEECCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFEIKEIENKLKPHEVYFLFKDEINSIFLDSSKEDSEFSLYSFIGLNPFKKFISKGNEI CCCCHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCCEEEEHHHCCCHHHHHHHCCCEE FIDEKLVLGDPFKKLEELILEYKINYNSEIPFLGGAMGYFSYDIGRVIEDMPKSAKDDVC EEECEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE IPDSYFLFYDNVIIFDLRNQKTYITALGIKEESEKSIANIYERIKDKDINLNISLDKNTE CCCCEEEEECCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC FSSNFSREEYINSVKKVKEYIKEGHTYIANLTQRFSCDFNSDPFDTYISLRSINKAPFSC CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCEEE YLNLDGFQIISSSPERFLKVFNNKVETRPIKGTRPRGKDKLEDEKNKKELLNSEKDKSEL EEECCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE LMIVDLERNDLSKVCKPFSVKVTELFKLEEYATVFHLVSTVIGELKEDVSSVKCIRECFP EEEEECCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGSITGAPKIRSMEIIEELEGIRRGIYTGSIGYFDLRGNCDFNIVIRTILAKDNKAYFGV CCCCCCCCCCHHHHHHHHHHHHHHCCEECCCEEEEECCCCCHHEEEEEEHHCCCCEEEEC GGGITIESEEEMEYEETLDKAKALMRVL CCCEEECCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6330050; 9097040; 9278503; 7896119; 2251281; 7592344 [H]