Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309995

Identifier: 18309995

GI number: 18309995

Start: 1215507

End: 1215752

Strand: Direct

Name: 18309995

Synonym: CPE1013

Alternate gene names: NA

Gene position: 1215507-1215752 (Clockwise)

Preceding gene: 18309994

Following gene: 18309998

Centisome position: 40.1

GC content: 30.89

Gene sequence:

>246_bases
ATGAATTATAAGACTACAGGAGTTTGTGCTAAGGAGATTAATTTTGAAATCGAAGATAACAAAATAAAAAGTGTTAGCTT
TGTAAATGGATGTCCAGGAAACTTAATGGGAGTTTCTAAGCTTGTTGAAGGAATGGATGTTGATGAAGCTATTTCTAAAT
TAAAAGGAATAGATTGCAGAGGAAAAGGAACATCTTGTCCAGATCAACTTGCAAAAGCTTTAGAAGAATATAAAAAAAGC
TTATAA

Upstream 100 bases:

>100_bases
GCTAAATTACCTAAAGATGCTAAAATAGAGATTGAAGTTATAGCTACTTTAAAATAGTTTCTATATCTTCATAATTAGCA
AGATAGGGGAGATTTTACTT

Downstream 100 bases:

>100_bases
CAAGCACAAAGAGCATATAGTTTAAGTAATTTTTGCTTAAGTTTAATATATTTCTCTAAATAAAAAAGTGACTATATAAA
ATTTATATAGTCACTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MNYKTTGVCAKEINFEIEDNKIKSVSFVNGCPGNLMGVSKLVEGMDVDEAISKLKGIDCRGKGTSCPDQLAKALEEYKKS
L

Sequences:

>Translated_81_residues
MNYKTTGVCAKEINFEIEDNKIKSVSFVNGCPGNLMGVSKLVEGMDVDEAISKLKGIDCRGKGTSCPDQLAKALEEYKKS
L
>Mature_81_residues
MNYKTTGVCAKEINFEIEDNKIKSVSFVNGCPGNLMGVSKLVEGMDVDEAISKLKGIDCRGKGTSCPDQLAKALEEYKKS
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8789; Mature: 8789

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKTTGVCAKEINFEIEDNKIKSVSFVNGCPGNLMGVSKLVEGMDVDEAISKLKGIDCR
CCCCCCCCCHHHCCCEECCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCC
GKGTSCPDQLAKALEEYKKSL
CCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNYKTTGVCAKEINFEIEDNKIKSVSFVNGCPGNLMGVSKLVEGMDVDEAISKLKGIDCR
CCCCCCCCCHHHCCCEECCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCC
GKGTSCPDQLAKALEEYKKSL
CCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA