| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309981
Identifier: 18309981
GI number: 18309981
Start: 1204190
End: 1204345
Strand: Direct
Name: 18309981
Synonym: CPE0999
Alternate gene names: NA
Gene position: 1204190-1204345 (Clockwise)
Preceding gene: 18309980
Following gene: 18309982
Centisome position: 39.72
GC content: 34.62
Gene sequence:
>156_bases ATGGCAGATAGAACATTAAAATGTAAAGACTGTGGAGCAGATTTCATATTCACTGAGGGAGAGCAAGCTTTCTACAAAGA AAAAGGATTTGAAAATGATCCAGTAAGATGCTTAGATTGCAGAAGAGCAAGAAAAGCTCAAAGAAACAATAGATAA
Upstream 100 bases:
>100_bases ATAACAGAAAAAGCTTTAAAAGATGAATAAAATTTTCCTTAAACTTAAAGAAAATTTTTATTAATCCATTTAAATCTTTA AATTTAAGGAGGATGTCAAA
Downstream 100 bases:
>100_bases TAATTTGTTTATTATAAGGTTGTAAGATTAGTCTTACAACCTTTTTTATTTTTATAATAAAAAATTCTTCCTAAATTGAA AGTATGTATAATTTTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MADRTLKCKDCGADFIFTEGEQAFYKEKGFENDPVRCLDCRRARKAQRNNR
Sequences:
>Translated_51_residues MADRTLKCKDCGADFIFTEGEQAFYKEKGFENDPVRCLDCRRARKAQRNNR >Mature_50_residues ADRTLKCKDCGADFIFTEGEQAFYKEKGFENDPVRCLDCRRARKAQRNNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6003; Mature: 5872
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 8.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRTLKCKDCGADFIFTEGEQAFYKEKGFENDPVRCLDCRRARKAQRNNR CCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure ADRTLKCKDCGADFIFTEGEQAFYKEKGFENDPVRCLDCRRARKAQRNNR CCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA