Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309979

Identifier: 18309979

GI number: 18309979

Start: 1200014

End: 1201693

Strand: Direct

Name: 18309979

Synonym: CPE0997

Alternate gene names: NA

Gene position: 1200014-1201693 (Clockwise)

Preceding gene: 18309978

Following gene: 18309980

Centisome position: 39.59

GC content: 25.65

Gene sequence:

>1680_bases
ATGGAATATGGAGATATTAAATTTTTAGTTAGGAAAAGTTTAAATACAGAAGAGGGACTAAATATAAGGCTTAAGATTAA
AGATGTTAATTTAAGAGAAATTCAGCTTTATAGGGGTAAAACAAAAATAAACAATATAAAGTGTAAAGAGGAGTTTTATT
GCGATTCAAACTTTATATATATTAATAATAAAAGCAGGGATTTGATTTTAGAATATGAGGTTTTAATAGGCAGTTTAGGT
AAGCATGGAAAAGGTGGAGAAATAGAAGAGGATTTAATAAGCTTTATGGGTGAACAAATACTTCTATTACCAGTTGAAAT
GCTTACAATGAATGATGACCTAAAATTAAATTGCATACTAGAAATAGATTTTACCAATCTTATAGAAGAGATAAAGAGTA
AGGTTTATAGTGAAAAGGATTATAAAATTATAATACCTTTTAAAGAAAATGATTTTAATTCAAAGTGTGTAGGGGGGGCT
TGGAGCGACCTATATGAAATAATGAAGTCTTCATATACCTTTGGCTTTTTTGAAGAAATTGTTTTAAAGAAAGAATATGG
AGAAGTACATTTATATAGTAGTATTGAAAATAAATTTTTAAATGACAGTAGTAAGGCAGAGCTTGTAAGAAATATAAAGT
TTATTTGTGATTATTATTATAATTTATTTAAAATAGATTCTCTAAATAAGAAAGATCTGAATATAGTTTTACTTAGAAAG
AGCAAAAAGGAGAACTCTTATATATTAGGCGGAAGCGGGAAAAATGTTATAAGTGCTACTTTTGATATGAATAAAAAGAG
AGATTGGCAATTATTATCCCATAGAATTTTTCATGCCTTTATGGATGATCTTTTAAAATCAAGAGTTTATCATCTTCCTC
CAAATCTTTGGTTAACAGAGGGATTAGCTACTTATTATGAAAACTTAGCTTTAGAATCCATAGAAAAGGGATTAAAAGAA
AGACTAGATATAAAGTTTAAAAAGGAAATGGCAAATTTATATACAAGATATTTATATATGACTTTAAAAGAGCCAAGCAG
ATTTAGAATAATTCCTATGGAAGAAGGAAGCATAAGAAGTCATGGAAAAATAGAGTTTTTACATTATACAAAGGCTCCTT
TATTAATATATTTTATAGAAAGTTTAAATAATTCATGTGGTAATAAAAATGAAATAATAGAATATTTAATTAATAACAAA
GAGAAGAGTTTTTCTATGCAAAATCTTTTTTATAATCTATTAGGTTTTAGGTGTGATAGCTTTGCATCTAAATATTTATT
TGGAAATAGTATAATTCCTCTATGGGACTTAAAAGAACATTTAGATGATAAAGATGTTATTTGTACTTTGCAGGAATATG
AGTATATTTTGTGGACATGGTTTTTAGGAGAAGAAGAAAATTATATTAAAGATGATCTTAGGGAATATAACAAAAATATT
GAGGAAATCATAAGCCTTAGAAATATTAATATTTATAATTCTTATTTAACAAAGGAAATTGAGGATTATTCTAAGAAATT
AAGCTTTTTATTAATGGCTTGGATTATTAGAAGTAATGTATGCAGTGTTTCTTCTCAAGATGAAAATATTAGATATAAAC
TTTTAAAAGATAAAGTGAATCTTAGAATTTGGAAGGAATTTGTACAGCAATCTATAAAAAATAAGGCGAATATAAGATAA

Upstream 100 bases:

>100_bases
TTTGAAAAAAGAAGGAATCTTTGAACCTTTAGAAAAATTATATATAAATAAATCTGGAGAAGTTATTAGAAATACAGAGA
CTTAGATTAGGAGGGTATAA

Downstream 100 bases:

>100_bases
GGCATCTATTAATTTTATGAAGGTTATAATATGATTTTTTTAGTTATAATATAAAATATTTAATAAATCAACATAATATA
TAAAGCTAACAAAATAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MEYGDIKFLVRKSLNTEEGLNIRLKIKDVNLREIQLYRGKTKINNIKCKEEFYCDSNFIYINNKSRDLILEYEVLIGSLG
KHGKGGEIEEDLISFMGEQILLLPVEMLTMNDDLKLNCILEIDFTNLIEEIKSKVYSEKDYKIIIPFKENDFNSKCVGGA
WSDLYEIMKSSYTFGFFEEIVLKKEYGEVHLYSSIENKFLNDSSKAELVRNIKFICDYYYNLFKIDSLNKKDLNIVLLRK
SKKENSYILGGSGKNVISATFDMNKKRDWQLLSHRIFHAFMDDLLKSRVYHLPPNLWLTEGLATYYENLALESIEKGLKE
RLDIKFKKEMANLYTRYLYMTLKEPSRFRIIPMEEGSIRSHGKIEFLHYTKAPLLIYFIESLNNSCGNKNEIIEYLINNK
EKSFSMQNLFYNLLGFRCDSFASKYLFGNSIIPLWDLKEHLDDKDVICTLQEYEYILWTWFLGEEENYIKDDLREYNKNI
EEIISLRNINIYNSYLTKEIEDYSKKLSFLLMAWIIRSNVCSVSSQDENIRYKLLKDKVNLRIWKEFVQQSIKNKANIR

Sequences:

>Translated_559_residues
MEYGDIKFLVRKSLNTEEGLNIRLKIKDVNLREIQLYRGKTKINNIKCKEEFYCDSNFIYINNKSRDLILEYEVLIGSLG
KHGKGGEIEEDLISFMGEQILLLPVEMLTMNDDLKLNCILEIDFTNLIEEIKSKVYSEKDYKIIIPFKENDFNSKCVGGA
WSDLYEIMKSSYTFGFFEEIVLKKEYGEVHLYSSIENKFLNDSSKAELVRNIKFICDYYYNLFKIDSLNKKDLNIVLLRK
SKKENSYILGGSGKNVISATFDMNKKRDWQLLSHRIFHAFMDDLLKSRVYHLPPNLWLTEGLATYYENLALESIEKGLKE
RLDIKFKKEMANLYTRYLYMTLKEPSRFRIIPMEEGSIRSHGKIEFLHYTKAPLLIYFIESLNNSCGNKNEIIEYLINNK
EKSFSMQNLFYNLLGFRCDSFASKYLFGNSIIPLWDLKEHLDDKDVICTLQEYEYILWTWFLGEEENYIKDDLREYNKNI
EEIISLRNINIYNSYLTKEIEDYSKKLSFLLMAWIIRSNVCSVSSQDENIRYKLLKDKVNLRIWKEFVQQSIKNKANIR
>Mature_559_residues
MEYGDIKFLVRKSLNTEEGLNIRLKIKDVNLREIQLYRGKTKINNIKCKEEFYCDSNFIYINNKSRDLILEYEVLIGSLG
KHGKGGEIEEDLISFMGEQILLLPVEMLTMNDDLKLNCILEIDFTNLIEEIKSKVYSEKDYKIIIPFKENDFNSKCVGGA
WSDLYEIMKSSYTFGFFEEIVLKKEYGEVHLYSSIENKFLNDSSKAELVRNIKFICDYYYNLFKIDSLNKKDLNIVLLRK
SKKENSYILGGSGKNVISATFDMNKKRDWQLLSHRIFHAFMDDLLKSRVYHLPPNLWLTEGLATYYENLALESIEKGLKE
RLDIKFKKEMANLYTRYLYMTLKEPSRFRIIPMEEGSIRSHGKIEFLHYTKAPLLIYFIESLNNSCGNKNEIIEYLINNK
EKSFSMQNLFYNLLGFRCDSFASKYLFGNSIIPLWDLKEHLDDKDVICTLQEYEYILWTWFLGEEENYIKDDLREYNKNI
EEIISLRNINIYNSYLTKEIEDYSKKLSFLLMAWIIRSNVCSVSSQDENIRYKLLKDKVNLRIWKEFVQQSIKNKANIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66288; Mature: 66288

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYGDIKFLVRKSLNTEEGLNIRLKIKDVNLREIQLYRGKTKINNIKCKEEFYCDSNFIY
CCCCCEEHHHHHCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCEEECHHEEECCEEEE
INNKSRDLILEYEVLIGSLGKHGKGGEIEEDLISFMGEQILLLPVEMLTMNDDLKLNCIL
EECCCCCEEEEHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEEEHEECCCCCEEEEEE
EIDFTNLIEEIKSKVYSEKDYKIIIPFKENDFNSKCVGGAWSDLYEIMKSSYTFGFFEEI
EECHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
VLKKEYGEVHLYSSIENKFLNDSSKAELVRNIKFICDYYYNLFKIDSLNKKDLNIVLLRK
HHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEE
SKKENSYILGGSGKNVISATFDMNKKRDWQLLSHRIFHAFMDDLLKSRVYHLPPNLWLTE
CCCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHH
GLATYYENLALESIEKGLKERLDIKFKKEMANLYTRYLYMTLKEPSRFRIIPMEEGSIRS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCC
HGKIEFLHYTKAPLLIYFIESLNNSCGNKNEIIEYLINNKEKSFSMQNLFYNLLGFRCDS
CCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FASKYLFGNSIIPLWDLKEHLDDKDVICTLQEYEYILWTWFLGEEENYIKDDLREYNKNI
HHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHCCH
EEIISLRNINIYNSYLTKEIEDYSKKLSFLLMAWIIRSNVCSVSSQDENIRYKLLKDKVN
HHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHH
LRIWKEFVQQSIKNKANIR
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEYGDIKFLVRKSLNTEEGLNIRLKIKDVNLREIQLYRGKTKINNIKCKEEFYCDSNFIY
CCCCCEEHHHHHCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCEEECHHEEECCEEEE
INNKSRDLILEYEVLIGSLGKHGKGGEIEEDLISFMGEQILLLPVEMLTMNDDLKLNCIL
EECCCCCEEEEHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEEEHEECCCCCEEEEEE
EIDFTNLIEEIKSKVYSEKDYKIIIPFKENDFNSKCVGGAWSDLYEIMKSSYTFGFFEEI
EECHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
VLKKEYGEVHLYSSIENKFLNDSSKAELVRNIKFICDYYYNLFKIDSLNKKDLNIVLLRK
HHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEE
SKKENSYILGGSGKNVISATFDMNKKRDWQLLSHRIFHAFMDDLLKSRVYHLPPNLWLTE
CCCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHH
GLATYYENLALESIEKGLKERLDIKFKKEMANLYTRYLYMTLKEPSRFRIIPMEEGSIRS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCC
HGKIEFLHYTKAPLLIYFIESLNNSCGNKNEIIEYLINNKEKSFSMQNLFYNLLGFRCDS
CCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FASKYLFGNSIIPLWDLKEHLDDKDVICTLQEYEYILWTWFLGEEENYIKDDLREYNKNI
HHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHCCH
EEIISLRNINIYNSYLTKEIEDYSKKLSFLLMAWIIRSNVCSVSSQDENIRYKLLKDKVN
HHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHH
LRIWKEFVQQSIKNKANIR
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA