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The map label for this gene is yhfE [H]

Identifier: 18309977

GI number: 18309977

Start: 1197974

End: 1199008

Strand: Direct

Name: yhfE [H]

Synonym: CPE0995

Alternate gene names: 18309977

Gene position: 1197974-1199008 (Clockwise)

Preceding gene: 18309975

Following gene: 18309978

Centisome position: 39.52

GC content: 32.08

Gene sequence:

>1035_bases
ATGGTAAGTATAAACAAAGATTTTATTTTAGATGTAGCAAAAGAAATTTTAAGTTTCCATAGTCCAAGTGGATTTTGTTT
TGAGATTATGGAAAAGGTAGAAAGAATAGTTAATAATCTAGGATATGATCTAGAATTGACTAACAAGGGATGTGGAGTAA
TAACCATTCCTGGAGAAAGTGATGAAAAGGTTATTGGATTAGCTGCTCATGTAGATACCTTAGGGGCTATGGTTAGATCT
ATAACACCAAATGGAACTTTAAAGTTTGATTTAGTAGGAGGTCCAATAGTACCAACTTTAGATTCAGAATACTGCATAAT
AAGAACAAGGGAAGGTAAAGAGTATACTGGAACTTTCTTAAGCACAAGCCCATCAATACATGTATTTGATGATGCATCAA
GCAAGCCTAGAGAGCCTAAGAATATGGAAATCAGAATTGATGAAAGAGTTTTAAATAAAGAGGATGTAAAGGCCTTAGGA
ATAAATAATGGAGATTTTATTTTTATAGATCCAAAAACAACAATAACTGAAAGTGGATTTATAAAATCAAGATTTATAGA
TGATAAGGGAAGTGTATCAGCTTTAATAGGATTATTAGAGCTATTAAAAAGAGAAAATATAAAGCCTAAATATAAAACAA
AAATCTTTATATCTGTATATGAAGAGGTAGGACATGGAGCATCATATTTACCAGAGGATATAACTGAATTTATAGCAGTA
GATATGGGATGTATTGGTGATGACTTAAGTTGCACAGAGTATGATGTTTCTATATGTGCAAAGGATTCAGGTGGACCTTA
TGACTATAAAATTACATCAGATCTTATAGAATTAGCTAAAAATAATAGTTTAAGCTATGCAGTAGATATATACCCTAGAT
ACGGCTCAGATGTTGGAGCTGCCTTACGAGGTGGAAATAATATAAAAGGTGGCCTTATAGGCCCTGGAGTTCACGCTTCA
CATGGTATGGAGAGAACTCACTATGATGCTTTAGAAAACACCATAAAACTAATATATTTATATTTAACAAGGTAA

Upstream 100 bases:

>100_bases
AGCAATTAAGTAACAAGATTCTTAAAAATAGAAATAGTAATTTATGGCATTATATGGCCTATATGTTATAATTAATATAT
AAATAGAGGGGGCGAAATAT

Downstream 100 bases:

>100_bases
AATAAGAAAAATAATTAACAAATTTGAGTCATCTAAAAGTGAAAAATACTTTTAGGTGACTTTTTTTAGATTATTATATA
ACTATTTATATATTTCACTT

Product: glucanase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MVSINKDFILDVAKEILSFHSPSGFCFEIMEKVERIVNNLGYDLELTNKGCGVITIPGESDEKVIGLAAHVDTLGAMVRS
ITPNGTLKFDLVGGPIVPTLDSEYCIIRTREGKEYTGTFLSTSPSIHVFDDASSKPREPKNMEIRIDERVLNKEDVKALG
INNGDFIFIDPKTTITESGFIKSRFIDDKGSVSALIGLLELLKRENIKPKYKTKIFISVYEEVGHGASYLPEDITEFIAV
DMGCIGDDLSCTEYDVSICAKDSGGPYDYKITSDLIELAKNNSLSYAVDIYPRYGSDVGAALRGGNNIKGGLIGPGVHAS
HGMERTHYDALENTIKLIYLYLTR

Sequences:

>Translated_344_residues
MVSINKDFILDVAKEILSFHSPSGFCFEIMEKVERIVNNLGYDLELTNKGCGVITIPGESDEKVIGLAAHVDTLGAMVRS
ITPNGTLKFDLVGGPIVPTLDSEYCIIRTREGKEYTGTFLSTSPSIHVFDDASSKPREPKNMEIRIDERVLNKEDVKALG
INNGDFIFIDPKTTITESGFIKSRFIDDKGSVSALIGLLELLKRENIKPKYKTKIFISVYEEVGHGASYLPEDITEFIAV
DMGCIGDDLSCTEYDVSICAKDSGGPYDYKITSDLIELAKNNSLSYAVDIYPRYGSDVGAALRGGNNIKGGLIGPGVHAS
HGMERTHYDALENTIKLIYLYLTR
>Mature_344_residues
MVSINKDFILDVAKEILSFHSPSGFCFEIMEKVERIVNNLGYDLELTNKGCGVITIPGESDEKVIGLAAHVDTLGAMVRS
ITPNGTLKFDLVGGPIVPTLDSEYCIIRTREGKEYTGTFLSTSPSIHVFDDASSKPREPKNMEIRIDERVLNKEDVKALG
INNGDFIFIDPKTTITESGFIKSRFIDDKGSVSALIGLLELLKRENIKPKYKTKIFISVYEEVGHGASYLPEDITEFIAV
DMGCIGDDLSCTEYDVSICAKDSGGPYDYKITSDLIELAKNNSLSYAVDIYPRYGSDVGAALRGGNNIKGGLIGPGVHAS
HGMERTHYDALENTIKLIYLYLTR

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 37830; Mature: 37830

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSINKDFILDVAKEILSFHSPSGFCFEIMEKVERIVNNLGYDLELTNKGCGVITIPGES
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCC
DEKVIGLAAHVDTLGAMVRSITPNGTLKFDLVGGPIVPTLDSEYCIIRTREGKEYTGTFL
CCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEECEEE
STSPSIHVFDDASSKPREPKNMEIRIDERVLNKEDVKALGINNGDFIFIDPKTTITESGF
ECCCCEEEEECCCCCCCCCCCCEEEEHHHHCCCCCCEEEECCCCCEEEECCCCEECCCCC
IKSRFIDDKGSVSALIGLLELLKRENIKPKYKTKIFISVYEEVGHGASYLPEDITEFIAV
EEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEEHHHHCCCCCCCHHHHHHHHHH
DMGCIGDDLSCTEYDVSICAKDSGGPYDYKITSDLIELAKNNSLSYAVDIYPRYGSDVGA
HHCCCCCCCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCHHH
ALRGGNNIKGGLIGPGVHASHGMERTHYDALENTIKLIYLYLTR
HHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHEEEEEEEEEC
>Mature Secondary Structure
MVSINKDFILDVAKEILSFHSPSGFCFEIMEKVERIVNNLGYDLELTNKGCGVITIPGES
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCC
DEKVIGLAAHVDTLGAMVRSITPNGTLKFDLVGGPIVPTLDSEYCIIRTREGKEYTGTFL
CCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEECEEE
STSPSIHVFDDASSKPREPKNMEIRIDERVLNKEDVKALGINNGDFIFIDPKTTITESGF
ECCCCEEEEECCCCCCCCCCCCEEEEHHHHCCCCCCEEEECCCCCEEEECCCCEECCCCC
IKSRFIDDKGSVSALIGLLELLKRENIKPKYKTKIFISVYEEVGHGASYLPEDITEFIAV
EEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEEEHHHHCCCCCCCHHHHHHHHHH
DMGCIGDDLSCTEYDVSICAKDSGGPYDYKITSDLIELAKNNSLSYAVDIYPRYGSDVGA
HHCCCCCCCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCHHH
ALRGGNNIKGGLIGPGVHASHGMERTHYDALENTIKLIYLYLTR
HHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]