| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309964
Identifier: 18309964
GI number: 18309964
Start: 1183266
End: 1183733
Strand: Direct
Name: 18309964
Synonym: CPE0982
Alternate gene names: NA
Gene position: 1183266-1183733 (Clockwise)
Preceding gene: 18309963
Following gene: 18309968
Centisome position: 39.03
GC content: 32.26
Gene sequence:
>468_bases ATGAATTATTGGCAAATATCAGCAGAGATAGGTAACACAAATTTAATAGATATATTCTTTGATTTAGGAGTAGCAATTGT TGGCCCTGGAGACAAAGGAGATTATTTTGACAATAAAGAAGAGTACGATATCTTAGGCAAAGAGGGAATAGTTATAAAGA GATTTGCTGAAGAAGTTAAGGTAGGAGATGTACTTATTTTAAAACAGATAAATTCAAGGGATGGAAGCTTTACTATTGTA GCAGCTGGTAAAGTAACAAGTCCATATAGATTTGAACCTGTATTTAACAAAGTAGGACTAGATGAATTGCCTATGCAGCA CTGTAGAAGGGTAAAATGGTATATTCCTACTGATGGCTTAGTAATAGATAAAGAAGGGTTAAGTATTGGATTACAAAAGC TTAAGGATGATAGCCCACTAAAAATAAAAGCTCAAGAATTTATGAATGAATTAAAGGATGAGAATTAA
Upstream 100 bases:
>100_bases AAACAAATATAAAATTAAAGAGTATAATAAATTATAAAGTAATATTTACTTTGTTGATAACTTTATTTTTATACTAATAG AATGAAAGAAGGTAATAATT
Downstream 100 bases:
>100_bases AAATTAATTATAAAAATTAAAAACCAAGCTTTAGCTTGGTTTTTTAGTTTGCAGTTTAGAAATTTCCATAATGTTTTTAT AATTATTATTTATAAATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNYWQISAEIGNTNLIDIFFDLGVAIVGPGDKGDYFDNKEEYDILGKEGIVIKRFAEEVKVGDVLILKQINSRDGSFTIV AAGKVTSPYRFEPVFNKVGLDELPMQHCRRVKWYIPTDGLVIDKEGLSIGLQKLKDDSPLKIKAQEFMNELKDEN
Sequences:
>Translated_155_residues MNYWQISAEIGNTNLIDIFFDLGVAIVGPGDKGDYFDNKEEYDILGKEGIVIKRFAEEVKVGDVLILKQINSRDGSFTIV AAGKVTSPYRFEPVFNKVGLDELPMQHCRRVKWYIPTDGLVIDKEGLSIGLQKLKDDSPLKIKAQEFMNELKDEN >Mature_155_residues MNYWQISAEIGNTNLIDIFFDLGVAIVGPGDKGDYFDNKEEYDILGKEGIVIKRFAEEVKVGDVLILKQINSRDGSFTIV AAGKVTSPYRFEPVFNKVGLDELPMQHCRRVKWYIPTDGLVIDKEGLSIGLQKLKDDSPLKIKAQEFMNELKDEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17528; Mature: 17528
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYWQISAEIGNTNLIDIFFDLGVAIVGPGDKGDYFDNKEEYDILGKEGIVIKRFAEEVK CCEEEEEEECCCCEEEEEEEECCEEEECCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHC VGDVLILKQINSRDGSFTIVAAGKVTSPYRFEPVFNKVGLDELPMQHCRRVKWYIPTDGL CCCEEEEEECCCCCCCEEEEECCCCCCCEEECHHHHHCCCCCCCHHHHCCEEEEECCCCE VIDKEGLSIGLQKLKDDSPLKIKAQEFMNELKDEN EEECCCCHHHHHHCCCCCCCEEEHHHHHHHHCCCC >Mature Secondary Structure MNYWQISAEIGNTNLIDIFFDLGVAIVGPGDKGDYFDNKEEYDILGKEGIVIKRFAEEVK CCEEEEEEECCCCEEEEEEEECCEEEECCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHC VGDVLILKQINSRDGSFTIVAAGKVTSPYRFEPVFNKVGLDELPMQHCRRVKWYIPTDGL CCCEEEEEECCCCCCCEEEEECCCCCCCEEECHHHHHCCCCCCCHHHHCCEEEEECCCCE VIDKEGLSIGLQKLKDDSPLKIKAQEFMNELKDEN EEECCCCHHHHHHCCCCCCCEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA