| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309953
Identifier: 18309953
GI number: 18309953
Start: 1170996
End: 1171616
Strand: Reverse
Name: 18309953
Synonym: CPE0971
Alternate gene names: NA
Gene position: 1171616-1170996 (Counterclockwise)
Preceding gene: 18309955
Following gene: 18309952
Centisome position: 38.65
GC content: 22.71
Gene sequence:
>621_bases ATGAAAGAACAATATTTTGAAAAATTACTAAACATAAAAACTTCTGGAGAACAAAAAATATTTAATGAATCTCTACATTA CAATAGATATGAACCTACATCTTATGCTGTATTAGAATCTATGTGTTCTCAATATGAATTTTCTAAAGAAGATTCCTTAA TCGATTTTGGATGTGGTAAAGGAAGACTTAATTTCTATTTAAATTACTTTTTAAATATTAAAGTTACAGGAATAGAGATG AATAACTTCTTTTTTAATGAATGCTTAGAAAATAAAAAATCTTATTTATCACAAAATAAAGTTAAGGAAGATAAATTAAA TTTTATAAATTGTTTTGCTGAAAGGTATCCTATAGATTCAAAGGATAATAAATTTTACTTTTTTAATCCCTTTTCAGAAC AAATATTTATAAAAGTTGTTGGAAATATTCTTGATTCTGTATCTAATCATGAGAGACCAGTAGATATTATACTTTATTAT CCCTCTGATGATTACATATACTATTTAGAAAACTACACTCCATTTTCTTTAAAGAAGGAAATAAAGATTCCTAATAAGTA TGAATATGACTCAAGAGAAAAAATCCTTATATATGAACTTAGTTATTTAAATTTAATATAA
Upstream 100 bases:
>100_bases AAGAATTCCTCGCCCTAAATTTTAACTTGCCCTATTTAAGGTAAAATACTATACTGATAATTGTAAATTTAAATACTAAA TTTTTATGAAAGAGGAGAAA
Downstream 100 bases:
>100_bases AATACTAAAGAAAAGAGAGGATTTATTTATGAATGAAACTATAAATTATGATTCATTGTTAATCTTATCTGTAGTAGCCT TTTTTACTCCCTTTTTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKEQYFEKLLNIKTSGEQKIFNESLHYNRYEPTSYAVLESMCSQYEFSKEDSLIDFGCGKGRLNFYLNYFLNIKVTGIEM NNFFFNECLENKKSYLSQNKVKEDKLNFINCFAERYPIDSKDNKFYFFNPFSEQIFIKVVGNILDSVSNHERPVDIILYY PSDDYIYYLENYTPFSLKKEIKIPNKYEYDSREKILIYELSYLNLI
Sequences:
>Translated_206_residues MKEQYFEKLLNIKTSGEQKIFNESLHYNRYEPTSYAVLESMCSQYEFSKEDSLIDFGCGKGRLNFYLNYFLNIKVTGIEM NNFFFNECLENKKSYLSQNKVKEDKLNFINCFAERYPIDSKDNKFYFFNPFSEQIFIKVVGNILDSVSNHERPVDIILYY PSDDYIYYLENYTPFSLKKEIKIPNKYEYDSREKILIYELSYLNLI >Mature_206_residues MKEQYFEKLLNIKTSGEQKIFNESLHYNRYEPTSYAVLESMCSQYEFSKEDSLIDFGCGKGRLNFYLNYFLNIKVTGIEM NNFFFNECLENKKSYLSQNKVKEDKLNFINCFAERYPIDSKDNKFYFFNPFSEQIFIKVVGNILDSVSNHERPVDIILYY PSDDYIYYLENYTPFSLKKEIKIPNKYEYDSREKILIYELSYLNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24794; Mature: 24794
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEQYFEKLLNIKTSGEQKIFNESLHYNRYEPTSYAVLESMCSQYEFSKEDSLIDFGCGK CCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCC GRLNFYLNYFLNIKVTGIEMNNFFFNECLENKKSYLSQNKVKEDKLNFINCFAERYPIDS CCEEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KDNKFYFFNPFSEQIFIKVVGNILDSVSNHERPVDIILYYPSDDYIYYLENYTPFSLKKE CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCEE IKIPNKYEYDSREKILIYELSYLNLI ECCCCCCCCCCCCEEEEEEEEEECCC >Mature Secondary Structure MKEQYFEKLLNIKTSGEQKIFNESLHYNRYEPTSYAVLESMCSQYEFSKEDSLIDFGCGK CCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCC GRLNFYLNYFLNIKVTGIEMNNFFFNECLENKKSYLSQNKVKEDKLNFINCFAERYPIDS CCEEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KDNKFYFFNPFSEQIFIKVVGNILDSVSNHERPVDIILYYPSDDYIYYLENYTPFSLKKE CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCEE IKIPNKYEYDSREKILIYELSYLNLI ECCCCCCCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA