| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is pduV [H]
Identifier: 18309876
GI number: 18309876
Start: 1096023
End: 1096457
Strand: Direct
Name: pduV [H]
Synonym: CPE0894
Alternate gene names: 18309876
Gene position: 1096023-1096457 (Clockwise)
Preceding gene: 18309875
Following gene: 18309877
Centisome position: 36.16
GC content: 30.57
Gene sequence:
>435_bases ATGGGAAGAGTAATATTTATGGGTAAGACAGGATGTGGAAAAACAACCTTATGTCAAGCCTTAAACAATCTAGAAATAAA ATATAAGAAAACTCAAGCCATAGAACTTTATGATAATGCCATAGATACTCCAGGAGAATATATGGAAAACAGGGGATACT ATACTGCTTTAATAGTTACAGCAGCAGATGCTGATATTATAGCTTTAGTATATGATTGTACCTCAGAGGAAAATTATATT GCTCCAGGGTTTGCAAGTATGTTTTGCAAAGAAGTTATAGGTATTATCACAAAGATAAATCTAGCTAAGGACAAGTCAGA AATAGAAGTAGCAGAAGAGAGATTAAATTTAGCTGGAGTAAGTAAAATATTTAAAGTTGATACAGTAGATGATGTAGGAA TTAAAGAGTTATTTAATTATCTAAACAAATTTTAA
Upstream 100 bases:
>100_bases TGGTGATATAAGTTCCGTTGAGTCAGCCTTAAATGAAGTTTTAGATGTTTTAGGTAACATTTTAAATTTCTCATCAACTA AGATCACGAGGACTTAATAT
Downstream 100 bases:
>100_bases TTTGAGGTGAACTGTTAATGAAAAGAACTATAGTAATAGTCGATGATGAGCCTATTACAAGAATGGATACAAGAGAAATT TTAGAGGCTAATGGATACGA
Product: propanediol utilization protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MGRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVTAADADIIALVYDCTSEENYI APGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGVSKIFKVDTVDDVGIKELFNYLNKF
Sequences:
>Translated_144_residues MGRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVTAADADIIALVYDCTSEENYI APGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGVSKIFKVDTVDDVGIKELFNYLNKF >Mature_143_residues GRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVTAADADIIALVYDCTSEENYIA PGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGVSKIFKVDTVDDVGIKELFNYLNKF
Specific function: Ethanolamine utilization. [C]
COG id: COG4917
COG function: function code E; Ethanolamine utilization protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutP/pduV family [H]
Homologues:
Organism=Escherichia coli, GI1788803, Length=146, Percent_Identity=33.5616438356164, Blast_Score=78, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012381 [H]
Pfam domain/function: PF10662 PduV-EutP [H]
EC number: NA
Molecular weight: Translated: 16030; Mature: 15898
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVT CCEEEEEECCCCCHHHHHHHHHCCEEEEECCCEEEEHHCCCCCCHHHHHCCCEEEEEEEE AADADIIALVYDCTSEENYIAPGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGV ECCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SKIFKVDTVDDVGIKELFNYLNKF HHHHEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure GRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVT CEEEEEECCCCCHHHHHHHHHCCEEEEECCCEEEEHHCCCCCCHHHHHCCCEEEEEEEE AADADIIALVYDCTSEENYIAPGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGV ECCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SKIFKVDTVDDVGIKELFNYLNKF HHHHEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10498708; 11677609 [H]