Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is pduV [H]

Identifier: 18309876

GI number: 18309876

Start: 1096023

End: 1096457

Strand: Direct

Name: pduV [H]

Synonym: CPE0894

Alternate gene names: 18309876

Gene position: 1096023-1096457 (Clockwise)

Preceding gene: 18309875

Following gene: 18309877

Centisome position: 36.16

GC content: 30.57

Gene sequence:

>435_bases
ATGGGAAGAGTAATATTTATGGGTAAGACAGGATGTGGAAAAACAACCTTATGTCAAGCCTTAAACAATCTAGAAATAAA
ATATAAGAAAACTCAAGCCATAGAACTTTATGATAATGCCATAGATACTCCAGGAGAATATATGGAAAACAGGGGATACT
ATACTGCTTTAATAGTTACAGCAGCAGATGCTGATATTATAGCTTTAGTATATGATTGTACCTCAGAGGAAAATTATATT
GCTCCAGGGTTTGCAAGTATGTTTTGCAAAGAAGTTATAGGTATTATCACAAAGATAAATCTAGCTAAGGACAAGTCAGA
AATAGAAGTAGCAGAAGAGAGATTAAATTTAGCTGGAGTAAGTAAAATATTTAAAGTTGATACAGTAGATGATGTAGGAA
TTAAAGAGTTATTTAATTATCTAAACAAATTTTAA

Upstream 100 bases:

>100_bases
TGGTGATATAAGTTCCGTTGAGTCAGCCTTAAATGAAGTTTTAGATGTTTTAGGTAACATTTTAAATTTCTCATCAACTA
AGATCACGAGGACTTAATAT

Downstream 100 bases:

>100_bases
TTTGAGGTGAACTGTTAATGAAAAGAACTATAGTAATAGTCGATGATGAGCCTATTACAAGAATGGATACAAGAGAAATT
TTAGAGGCTAATGGATACGA

Product: propanediol utilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MGRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVTAADADIIALVYDCTSEENYI
APGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGVSKIFKVDTVDDVGIKELFNYLNKF

Sequences:

>Translated_144_residues
MGRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVTAADADIIALVYDCTSEENYI
APGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGVSKIFKVDTVDDVGIKELFNYLNKF
>Mature_143_residues
GRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVTAADADIIALVYDCTSEENYIA
PGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGVSKIFKVDTVDDVGIKELFNYLNKF

Specific function: Ethanolamine utilization. [C]

COG id: COG4917

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eutP/pduV family [H]

Homologues:

Organism=Escherichia coli, GI1788803, Length=146, Percent_Identity=33.5616438356164, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012381 [H]

Pfam domain/function: PF10662 PduV-EutP [H]

EC number: NA

Molecular weight: Translated: 16030; Mature: 15898

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVT
CCEEEEEECCCCCHHHHHHHHHCCEEEEECCCEEEEHHCCCCCCHHHHHCCCEEEEEEEE
AADADIIALVYDCTSEENYIAPGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGV
ECCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SKIFKVDTVDDVGIKELFNYLNKF
HHHHEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
GRVIFMGKTGCGKTTLCQALNNLEIKYKKTQAIELYDNAIDTPGEYMENRGYYTALIVT
CEEEEEECCCCCHHHHHHHHHCCEEEEECCCEEEEHHCCCCCCHHHHHCCCEEEEEEEE
AADADIIALVYDCTSEENYIAPGFASMFCKEVIGIITKINLAKDKSEIEVAEERLNLAGV
ECCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SKIFKVDTVDDVGIKELFNYLNKF
HHHHEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10498708; 11677609 [H]