| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is adh1 [H]
Identifier: 18309874
GI number: 18309874
Start: 1094185
End: 1095315
Strand: Direct
Name: adh1 [H]
Synonym: CPE0892
Alternate gene names: 18309874
Gene position: 1094185-1095315 (Clockwise)
Preceding gene: 18309873
Following gene: 18309875
Centisome position: 36.09
GC content: 29.89
Gene sequence:
>1131_bases ATGAAAAGGTTTAAGATTAAGACAGAAATACTTTTTGGAGAAGGAGCCTTAGATTACCTAAAGGAACTTAAGAATAAAAA AGTTTTTATAGTAACAGATCCTTTTATGGTTAAGTCAGGGACTATAGAAAAATTAACTAATAACCTTAAATCATCTGAGG TTTTTGTATTTAGTGAAATAGTTCCAGATCCACCTATTGAGTTAGTTGTAAGTGGAATAGAAATGCTTAAAGATTTTAAT CCTGATGTTGTTATTGCTTTAGGGGGAGGGTCTGCTATAGATGCAACTAAGGCAATAATAGATTTTTCTAAAAAATTAGT TAAATTAAATGATATTAAGTTTATAGCTATACCAACAACAAGTGGTACAGGCTCAGAAGTAACTTCATTTTCCGTAATAA CAGATAAGCAAAAAGGAGTTAAATATCCTTTAGTATCAGATGAATTATTACCAGACATAGCAATTTTAGATCCAGAACTT GTTAAAACAGTTCCAAATTTTATAACTGCTGATACAGGAATGGATGTACTTACTCATGCATTAGAAGCATATGTTTCTAA AAATGCAACAGACTTTTCAGATGCTTTAGCTGAAAAAGCAGCTACTTTAGTTTTTAAATATTTATTAAAAGCTTATGAAA ATGGAAATGATATAGAAGCTAGGGAAAAAATGCATAATGCTTCTTGTTTAGCCGGGTTAGCCTTTAATGAGGCTTCTTTA GGAGTAAACCATGGTATTGCCCATGTTTTAGGAGGAAAATTCCATGTTCCTCATGGAAGAACTAACTCAATATTATTACC ACATGTAATAGAATATAATGCAAACATAACAAGCTATAATTCTAAGGAATTTAGTGAAGCTGCAGAAAAATATGCTAAAA TAGCTAAAATGGTTGGATTACAAGGATCAAATACTAGAGGATTAGTAAAAAATCTTGTAAATGAAATTAAAAAGATGCAA AAGGCAATGAATATGCCTACAACTTTAAGAGAATGTAAAGTTAATTGTGATGAACTAAAGAGTTTAGAGAATGAAATAGC TCAATTAGCATTAAAGGATGCATGTACAGAAAGTAATCCAAGAGTGCCAGATGAAAATGATATAATATCTATTTTAAACA AAATTAAATAG
Upstream 100 bases:
>100_bases ATATTAAACAAGAAAGATCAACAAAAAAACTACCCGTAAACTAAAAATATACTTATAAATAAGCTCTTACCCATAATTAA TAAAAAGAGGGGAGCTAAAA
Downstream 100 bases:
>100_bases TTTTTTTATAAGCTTCAAAATAGGACTGATATGCTTAGAAATTATCCTTTTTTGGAGCTTATTTTAGATAGGCATAGATA TATACTTAATAAAGAATCAG
Product: NADPH-dependent butanol dehydrogenase
Products: Acetyl-CoA; H+; Nicotinamide adenine dinucleotide - reduced [C]
Alternate protein names: BDH [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKRFKIKTEILFGEGALDYLKELKNKKVFIVTDPFMVKSGTIEKLTNNLKSSEVFVFSEIVPDPPIELVVSGIEMLKDFN PDVVIALGGGSAIDATKAIIDFSKKLVKLNDIKFIAIPTTSGTGSEVTSFSVITDKQKGVKYPLVSDELLPDIAILDPEL VKTVPNFITADTGMDVLTHALEAYVSKNATDFSDALAEKAATLVFKYLLKAYENGNDIEAREKMHNASCLAGLAFNEASL GVNHGIAHVLGGKFHVPHGRTNSILLPHVIEYNANITSYNSKEFSEAAEKYAKIAKMVGLQGSNTRGLVKNLVNEIKKMQ KAMNMPTTLRECKVNCDELKSLENEIAQLALKDACTESNPRVPDENDIISILNKIK
Sequences:
>Translated_376_residues MKRFKIKTEILFGEGALDYLKELKNKKVFIVTDPFMVKSGTIEKLTNNLKSSEVFVFSEIVPDPPIELVVSGIEMLKDFN PDVVIALGGGSAIDATKAIIDFSKKLVKLNDIKFIAIPTTSGTGSEVTSFSVITDKQKGVKYPLVSDELLPDIAILDPEL VKTVPNFITADTGMDVLTHALEAYVSKNATDFSDALAEKAATLVFKYLLKAYENGNDIEAREKMHNASCLAGLAFNEASL GVNHGIAHVLGGKFHVPHGRTNSILLPHVIEYNANITSYNSKEFSEAAEKYAKIAKMVGLQGSNTRGLVKNLVNEIKKMQ KAMNMPTTLRECKVNCDELKSLENEIAQLALKDACTESNPRVPDENDIISILNKIK >Mature_376_residues MKRFKIKTEILFGEGALDYLKELKNKKVFIVTDPFMVKSGTIEKLTNNLKSSEVFVFSEIVPDPPIELVVSGIEMLKDFN PDVVIALGGGSAIDATKAIIDFSKKLVKLNDIKFIAIPTTSGTGSEVTSFSVITDKQKGVKYPLVSDELLPDIAILDPEL VKTVPNFITADTGMDVLTHALEAYVSKNATDFSDALAEKAATLVFKYLLKAYENGNDIEAREKMHNASCLAGLAFNEASL GVNHGIAHVLGGKFHVPHGRTNSILLPHVIEYNANITSYNSKEFSEAAEKYAKIAKMVGLQGSNTRGLVKNLVNEIKKMQ KAMNMPTTLRECKVNCDELKSLENEIAQLALKDACTESNPRVPDENDIISILNKIK
Specific function: This enzyme has activity using butanol and ethanol as substrates [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=318, Percent_Identity=27.6729559748428, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1787493, Length=408, Percent_Identity=37.5, Blast_Score=258, Evalue=5e-70, Organism=Escherichia coli, GI87082107, Length=388, Percent_Identity=34.2783505154639, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI48994951, Length=369, Percent_Identity=35.230352303523, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1789163, Length=392, Percent_Identity=32.6530612244898, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1789386, Length=285, Percent_Identity=28.0701754385965, Blast_Score=85, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17537053, Length=290, Percent_Identity=26.551724137931, Blast_Score=97, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321181, Length=389, Percent_Identity=34.9614395886889, Blast_Score=219, Evalue=4e-58, Organism=Drosophila melanogaster, GI24657991, Length=412, Percent_Identity=24.0291262135922, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: 1.1.1.1; 1.2.1.10 [C]
Molecular weight: Translated: 41194; Mature: 41194
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00913 ADH_IRON_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFKIKTEILFGEGALDYLKELKNKKVFIVTDPFMVKSGTIEKLTNNLKSSEVFVFSEI CCCEEEEEEEEECCCHHHHHHHHCCCEEEEEECCEEECCCCHHHHHCCCCCCCEEEEECC VPDPPIELVVSGIEMLKDFNPDVVIALGGGSAIDATKAIIDFSKKLVKLNDIKFIAIPTT CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEECCEEEEEEECC SGTGSEVTSFSVITDKQKGVKYPLVSDELLPDIAILDPELVKTVPNFITADTGMDVLTHA CCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHH LEAYVSKNATDFSDALAEKAATLVFKYLLKAYENGNDIEAREKMHNASCLAGLAFNEASL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHEECCCCC GVNHGIAHVLGGKFHVPHGRTNSILLPHVIEYNANITSYNSKEFSEAAEKYAKIAKMVGL CHHHCHHHHHCCEEECCCCCCCCEECCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC QGSNTRGLVKNLVNEIKKMQKAMNMPTTLRECKVNCDELKSLENEIAQLALKDACTESNP CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC RVPDENDIISILNKIK CCCCCHHHHHHHHHCC >Mature Secondary Structure MKRFKIKTEILFGEGALDYLKELKNKKVFIVTDPFMVKSGTIEKLTNNLKSSEVFVFSEI CCCEEEEEEEEECCCHHHHHHHHCCCEEEEEECCEEECCCCHHHHHCCCCCCCEEEEECC VPDPPIELVVSGIEMLKDFNPDVVIALGGGSAIDATKAIIDFSKKLVKLNDIKFIAIPTT CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEECCEEEEEEECC SGTGSEVTSFSVITDKQKGVKYPLVSDELLPDIAILDPELVKTVPNFITADTGMDVLTHA CCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHH LEAYVSKNATDFSDALAEKAATLVFKYLLKAYENGNDIEAREKMHNASCLAGLAFNEASL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHEECCCCC GVNHGIAHVLGGKFHVPHGRTNSILLPHVIEYNANITSYNSKEFSEAAEKYAKIAKMVGL CHHHCHHHHHCCEEECCCCCCCCEECCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC QGSNTRGLVKNLVNEIKKMQKAMNMPTTLRECKVNCDELKSLENEIAQLALKDACTESNP CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC RVPDENDIISILNKIK CCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): 1000 [C]
Specific activity: NA
Km value (mM): 0.15 {ethanol}} 7.05 {acetaldehyde}} 0.1 {acetaldehyde}} [C]
Substrates: Acetaldehyde; Coenzyme A; Nicotinamide adenine dinucleotide [C]
Specific reaction: Acetaldehyde + Coenzyme A + Nicotinamide adenine dinucleotide --> Acetyl-CoA + H+ + Nicotinamide adenine dinucleotide - reduced [C]
General reaction: Redox reaction [C]
Inhibitor: 8-Hydroxy quinoline-5-sulfonic acid; Dipicolinic acid; EDTA; Ethanol; GSH; Heptafluorbutanol; Imidazole; Iodoacetamide; Iodoacetate; Isobutyramide EDTA; NAD+; NADH; NEM; o-Phenanthroline of Zn2+; PCMB; Pyrazole; Substituted pyrazoles 4-iodo-; Zn2+ [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2673928 [H]