| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309873
Identifier: 18309873
GI number: 18309873
Start: 1093462
End: 1093917
Strand: Direct
Name: 18309873
Synonym: CPE0891
Alternate gene names: NA
Gene position: 1093462-1093917 (Clockwise)
Preceding gene: 18309872
Following gene: 18309874
Centisome position: 36.07
GC content: 24.78
Gene sequence:
>456_bases ATATGCTTTGCCAATATCCGTTATAGGAGGCGTAGTTGGCACCCTAATAAGCTATTCTGTGGGAATGTATGCAGGAAAAA AGTAATTTCATTTGCTAAGAGAAAGCATAAAAAAAGTAAATCTATATTTGAAAAAATAGATAGGTTATTTTCTAGGTATG GCAAAATAACAGTTTTCTTAGCTAGATTATTACCATTTACAAGAACATATATATCACTTTTTGCAGGAGCTGAGAAGGTT AATAAAATTATGTTTGTTATATTTTCAGCTTTAGGTATAACAATAATGGATAGTTTCTATCTTCTATTAGGATATTTTGC ATATGATAATAAATCATTTATAGAAAAAGCTTTAAGACATTATTCAATAGCATTAATAATTATAATAGTAATAGCTATTT TTTCATATTATATTTATAAAAATCTAAAATTAAAGAAACTTAAAAAAGAGAATTAA
Upstream 100 bases:
>100_bases TTATATTAAACATGCTTGAATATGCTTGTTTACCATTTCCAAGTGAAATTGTATTACCTGCAATAGGTGCTAGTGTAGCA AGTGGTAAATATAGCATGAT
Downstream 100 bases:
>100_bases GTTTTATTGACAAGTTTTTTTAAAAAGAGTATATTAAAAATAACACGATGTGGTGTTTAGAGAGCAAAGAAGCTCCATAG GAAATCCCTATGGAGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFLARLLPFTRTYISLFAGAEKV NKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRHYSIALIIIIVIAIFSYYIYKNLKLKKLKKEN
Sequences:
>Translated_151_residues MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFLARLLPFTRTYISLFAGAEKV NKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRHYSIALIIIIVIAIFSYYIYKNLKLKKLKKEN >Mature_151_residues MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFLARLLPFTRTYISLFAGAEKV NKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRHYSIALIIIIVIAIFSYYIYKNLKLKKLKKEN
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17948; Mature: 17948
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFL CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLLPFTRTYISLFAGAEKVNKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YSIALIIIIVIAIFSYYIYKNLKLKKLKKEN HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFL CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLLPFTRTYISLFAGAEKVNKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YSIALIIIIVIAIFSYYIYKNLKLKKLKKEN HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA