Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309873

Identifier: 18309873

GI number: 18309873

Start: 1093462

End: 1093917

Strand: Direct

Name: 18309873

Synonym: CPE0891

Alternate gene names: NA

Gene position: 1093462-1093917 (Clockwise)

Preceding gene: 18309872

Following gene: 18309874

Centisome position: 36.07

GC content: 24.78

Gene sequence:

>456_bases
ATATGCTTTGCCAATATCCGTTATAGGAGGCGTAGTTGGCACCCTAATAAGCTATTCTGTGGGAATGTATGCAGGAAAAA
AGTAATTTCATTTGCTAAGAGAAAGCATAAAAAAAGTAAATCTATATTTGAAAAAATAGATAGGTTATTTTCTAGGTATG
GCAAAATAACAGTTTTCTTAGCTAGATTATTACCATTTACAAGAACATATATATCACTTTTTGCAGGAGCTGAGAAGGTT
AATAAAATTATGTTTGTTATATTTTCAGCTTTAGGTATAACAATAATGGATAGTTTCTATCTTCTATTAGGATATTTTGC
ATATGATAATAAATCATTTATAGAAAAAGCTTTAAGACATTATTCAATAGCATTAATAATTATAATAGTAATAGCTATTT
TTTCATATTATATTTATAAAAATCTAAAATTAAAGAAACTTAAAAAAGAGAATTAA

Upstream 100 bases:

>100_bases
TTATATTAAACATGCTTGAATATGCTTGTTTACCATTTCCAAGTGAAATTGTATTACCTGCAATAGGTGCTAGTGTAGCA
AGTGGTAAATATAGCATGAT

Downstream 100 bases:

>100_bases
GTTTTATTGACAAGTTTTTTTAAAAAGAGTATATTAAAAATAACACGATGTGGTGTTTAGAGAGCAAAGAAGCTCCATAG
GAAATCCCTATGGAGCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFLARLLPFTRTYISLFAGAEKV
NKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRHYSIALIIIIVIAIFSYYIYKNLKLKKLKKEN

Sequences:

>Translated_151_residues
MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFLARLLPFTRTYISLFAGAEKV
NKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRHYSIALIIIIVIAIFSYYIYKNLKLKKLKKEN
>Mature_151_residues
MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFLARLLPFTRTYISLFAGAEKV
NKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRHYSIALIIIIVIAIFSYYIYKNLKLKKLKKEN

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17948; Mature: 17948

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFL
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLPFTRTYISLFAGAEKVNKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YSIALIIIIVIAIFSYYIYKNLKLKKLKKEN
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure
MCFANIRYRRRSWHPNKLFCGNVCRKKVISFAKRKHKKSKSIFEKIDRLFSRYGKITVFL
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLPFTRTYISLFAGAEKVNKIMFVIFSALGITIMDSFYLLLGYFAYDNKSFIEKALRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YSIALIIIIVIAIFSYYIYKNLKLKKLKKEN
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA