| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309825
Identifier: 18309825
GI number: 18309825
Start: 1030943
End: 1031356
Strand: Direct
Name: 18309825
Synonym: CPE0843
Alternate gene names: NA
Gene position: 1030943-1031356 (Clockwise)
Preceding gene: 18309824
Following gene: 18309828
Centisome position: 34.01
GC content: 24.15
Gene sequence:
>414_bases ATGTATAGAACTAGATTATATGATTTAGGATTAGCAGGAGTTTTTAAAAAATATGCTAATAAAATATTAGGAGCTAATTT TGAAACTGCGAATCCTTGGGAAGTTGAAGATAAACTTAATGTTTTAATAAATAGATTTAATAATTTAAAAGAAGCAACTT TAGAAGAAATAGCAAAATTTCATTTGGTATTTGAAAGAATACATCCATTTCAAGATGGTAATGGGAGAATTGGTAGATTT ATATTCTTAAAACAATTGCTTGATAATAGATTACCACTTAAATATATGAATGGCGAAAGTTCAACTGAATATAAAAAAGC TTTAGGTGAATCTACAAATGATAATGTAAGACCATTAATTGAATATTTGAATAAACAAAAAGATTTTATTGAAGATAATA GGAATATGTTTTAA
Upstream 100 bases:
>100_bases ACAGGAAACTGTTAATTCATTTTATACATTTGATTTAGTTATTGATAGTTTAGATAAACCTTTAACTTTAGAAATGCTAA AAGAGTGGCATGCTAGTTTA
Downstream 100 bases:
>100_bases TAAATCAAGAATTATTTATACCGTACTATTTAAAAATGTAAAAGTAATAATTGGAGTTGCAGAGTTATATGATAGGTATG AGCCTTCTCCTGACTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentation Induced By CAMP Protein Fic; Truncated Fic Protein Family Protein; Fic Family xin-Antitoxin System Toxin Component
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MYRTRLYDLGLAGVFKKYANKILGANFETANPWEVEDKLNVLINRFNNLKEATLEEIAKFHLVFERIHPFQDGNGRIGRF IFLKQLLDNRLPLKYMNGESSTEYKKALGESTNDNVRPLIEYLNKQKDFIEDNRNMF
Sequences:
>Translated_137_residues MYRTRLYDLGLAGVFKKYANKILGANFETANPWEVEDKLNVLINRFNNLKEATLEEIAKFHLVFERIHPFQDGNGRIGRF IFLKQLLDNRLPLKYMNGESSTEYKKALGESTNDNVRPLIEYLNKQKDFIEDNRNMF >Mature_137_residues MYRTRLYDLGLAGVFKKYANKILGANFETANPWEVEDKLNVLINRFNNLKEATLEEIAKFHLVFERIHPFQDGNGRIGRF IFLKQLLDNRLPLKYMNGESSTEYKKALGESTNDNVRPLIEYLNKQKDFIEDNRNMF
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16152; Mature: 16152
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRTRLYDLGLAGVFKKYANKILGANFETANPWEVEDKLNVLINRFNNLKEATLEEIAKF CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HLVFERIHPFQDGNGRIGRFIFLKQLLDNRLPLKYMNGESSTEYKKALGESTNDNVRPLI HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCCCCCHHHHH EYLNKQKDFIEDNRNMF HHHHHHHHHHHCCCCCC >Mature Secondary Structure MYRTRLYDLGLAGVFKKYANKILGANFETANPWEVEDKLNVLINRFNNLKEATLEEIAKF CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HLVFERIHPFQDGNGRIGRFIFLKQLLDNRLPLKYMNGESSTEYKKALGESTNDNVRPLI HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCCCCCHHHHH EYLNKQKDFIEDNRNMF HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA