| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is manZ [H]
Identifier: 18309805
GI number: 18309805
Start: 1007953
End: 1008444
Strand: Direct
Name: manZ [H]
Synonym: CPE0823
Alternate gene names: 18309805
Gene position: 1007953-1008444 (Clockwise)
Preceding gene: 18309804
Following gene: 18309806
Centisome position: 33.25
GC content: 35.77
Gene sequence:
>492_bases ATGGAGAAAAATTTAAAATTAACAAAAAAAGATCGTCTTTCTATTTGGTGGCGTTCAACTTTCATTCAAGGATCTTGGAA CTATGAAAGAATGCAAAATGGTGGTTGGGCATTCTCATTAATTCCTGCAATCAAAAAATTATACAAAACTAAAGAAGAAA GATCAGCGGCATTAACACGTCACTTAGAATTCTTCAACACTCACCCATATGTAGCTTCACCTATCATTGGTGTAACATTA GCATTAGAAGAAGATCGTGCAAATGGAGCTCAAGTAGATGATGTAACTATTCAAGGGGTTAAAGTTGTTATGATGGGACC TTTAGCAGGTATCGGAGACCCTGTATTCTGGTTTACTGTTAGACCTATATTAGGAGCATTAGGTGCTTCACTTGCTATGG CTGGTAACCATATTAGGACCAATAATATTCTTCTTAGGTTGGAATATTATCCGTATGGCATTTACTTGGTACACACAAGA ATTTGGTTATAA
Upstream 100 bases:
>100_bases GCACTTAGCAAAAAAGGTGGCTCAGGTAATGGTGGATCAAACATAGGAGATCCAGTAGGCGATATTATCGATAGATACTA AGAAGGGAGAGAAGACGAAA
Downstream 100 bases:
>100_bases AGCTGGTTCTCGTATTACAGAGGACTTATCAGGAAACTTATTACAAGATATTACAAAAGGTGCATCTATACTTGGTATGT TTATATTAGGATCACTAGTT
Product: PTS system
Products: protein histidine; sugar phosphate; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]
Alternate protein names: EII-M-Man; EIID-Man; PTS system mannose-specific EIID component [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTRHLEFFNTHPYVASPIIGVTL ALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTVRPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTR IWL
Sequences:
>Translated_163_residues MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTRHLEFFNTHPYVASPIIGVTL ALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTVRPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTR IWL >Mature_163_residues MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTRHLEFFNTHPYVASPIIGVTL ALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTVRPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTR IWL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3716
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIID domain [H]
Homologues:
Organism=Escherichia coli, GI1788122, Length=132, Percent_Identity=60.6060606060606, Blast_Score=178, Evalue=1e-46, Organism=Escherichia coli, GI1789529, Length=132, Percent_Identity=43.1818181818182, Blast_Score=119, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004704 - InterPro: IPR018405 [H]
Pfam domain/function: PF03613 EIID-AGA [H]
EC number: NA
Molecular weight: Translated: 18580; Mature: 18580
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS51108 PTS_EIID
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTR CCCCCCCCCCCCEEEEEEEEEEECCCCHHHHCCCCEEEEHHHHHHHHHHCHHHHHHHHHH HLEFFNTHPYVASPIIGVTLALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTV HHHHHCCCCCCCCCCEEEEEEEECCCCCCCEECCEEECCEEEEEECCCCCCCCCHHEEEH RPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTRIWL HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEEEECC >Mature Secondary Structure MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTR CCCCCCCCCCCCEEEEEEEEEEECCCCHHHHCCCCEEEEHHHHHHHHHHCHHHHHHHHHH HLEFFNTHPYVASPIIGVTLALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTV HHHHHCCCCCCCCCCEEEEEEEECCCCCCCEECCEEECCEEEEEECCCCCCCCCHHEEEH RPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTRIWL HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N p -phosphohistidine; sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]
Specific reaction: protein N p -phosphohistidine + sugar = protein histidine + sugar phosphate phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]