Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309778

Identifier: 18309778

GI number: 18309778

Start: 979635

End: 980150

Strand: Direct

Name: 18309778

Synonym: CPE0796

Alternate gene names: NA

Gene position: 979635-980150 (Clockwise)

Preceding gene: 18309777

Following gene: 18309780

Centisome position: 32.32

GC content: 29.84

Gene sequence:

>516_bases
ATGTATTTTAATAAAGTTCTAGGGATGAAAGAGTTTGGAAAAGATGAAAAGGTATTTTATAGAGTTGCCATAAGGGCAAT
TATTTTACAGGGTGATAAAATACTTATGGTAAAATCTAATACAGGAGATTTTAAGTTCCCAGGTGGCGGAGTTGAAAAAG
GGGAGACTCCAGAGGAAACCTTAAGAAGAGAAGTTCAAGAAGAAACAGGATACATATTAAATGAAGTTAAAGAAAAATTT
GGAGTTTTAATTGAAAGAGATAGAAGAAGGAGAATGGGTTGTACAATTTTTGAAATGACCTCTCATTATTATCTTTGCAG
TGTTATTGAAGAAAGAGGAGAACAACATTTAGATAAGTATGAGGAAGAGCTAGGTTTTACTCCTATATGGATTTCTTTAG
ATGAGGTAATTAGAGAGAATGAAAATATACTTAATCAAAGAGAAAAAATTAATCCATGGGTTAAAAGAGAAACTTTTGTA
CTTAAAAAGATTAAAGAATATTTAAATGAAAATTAG

Upstream 100 bases:

>100_bases
ATAATATTAAAATGCAGATGATTATTAGGGGAGTTTAGGGAATAAACTCCCTTCTTTTTTGTATTTATGGATATATTAAT
TTCATTAAAGGGGTGAAGAT

Downstream 100 bases:

>100_bases
TTCTAAATATAAAAATACTTTATCAAAAAGATATTAAAATTTTTGATAAAGTATTTTTCTTTGTATAGATTTTTAATTTA
AATATTATATAGTATAGAAA

Product: MutT/nudix family protein

Products: NA

Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Nudix Hydrolase Protein; MutT/NUDIX Protein; Nudix Hydrolase; Phosphohydrolase; NTP Pyrophosphohydrolase; NUDIX Hydrolase Superfamily Protein

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEETLRREVQEETGYILNEVKEKF
GVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKYEEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFV
LKKIKEYLNEN

Sequences:

>Translated_171_residues
MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEETLRREVQEETGYILNEVKEKF
GVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKYEEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFV
LKKIKEYLNEN
>Mature_171_residues
MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEETLRREVQEETGYILNEVKEKF
GVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKYEEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFV
LKKIKEYLNEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20337; Mature: 20337

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEET
CCCHHHCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCHHHH
LRREVQEETGYILNEVKEKFGVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFVLKKIKEYLNEN
HHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEET
CCCHHHCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCHHHH
LRREVQEETGYILNEVKEKFGVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFVLKKIKEYLNEN
HHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA