| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309770
Identifier: 18309770
GI number: 18309770
Start: 972580
End: 973083
Strand: Direct
Name: 18309770
Synonym: CPE0788
Alternate gene names: NA
Gene position: 972580-973083 (Clockwise)
Preceding gene: 18309769
Following gene: 18309771
Centisome position: 32.08
GC content: 24.8
Gene sequence:
>504_bases ATGAAAGAATTAAGAATAAAGAAATTTACTGTAGAAGAATTTAAAAATAAGTTTAACTTAGATAATATAGAAAATATTTC AGCTTATGAAGTAAGTGAATTAGGAAATCTTTTTGAGAATTCATCTGAAGAGGTTTATTTCTTAATTGAAGATAAATTAT ATGCTGAGCCAAAGGAAGCTATAGGGGAAGGAGAACTTTCTAGAGAGGATATTGAAACTATAGAAAAATTAAATGAAGAA TTTAGAGATTCTTTAATAAGCTTAAGAGAGTTTTTATATCATGGAAATGGAAAATTAGATTCAGAAGAGGCTAGAGATAT TCAAGTTTCAATGAATAATAATATAAAATCAGCTAAAGAAATTTTAAATAGACATAATATAGTTGATAAAGACCAATTAA AGAAAATGAGTAAAAAATACTTTATGCCAGACTTCTTAAATGGTGTATTTGGTAATGAAGAATATAATTTTGAAAATGAA GTAGAAATAGACTGCGGATTATAA
Upstream 100 bases:
>100_bases TATTTTAGATTAATAATGATATAATAAACTTATTATTTTTAATAAGAGATTAGAATATTTATTTAATGATTTAAAATATT CAAAAAGGAGATATACATAT
Downstream 100 bases:
>100_bases GAGAAAGCTATATCAAATCTTTACTTGGTTTGATATAGCTTTTTTATTTAAATAATTATATTTAATGTTGACAATATCAT TAATTAGTGATAAATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEAIGEGELSREDIETIEKLNEE FRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKEILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENE VEIDCGL
Sequences:
>Translated_167_residues MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEAIGEGELSREDIETIEKLNEE FRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKEILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENE VEIDCGL >Mature_167_residues MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEAIGEGELSREDIETIEKLNEE FRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKEILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENE VEIDCGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19610; Mature: 19610
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEA CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHH IGEGELSREDIETIEKLNEEFRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKE HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHH ILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENEVEIDCGL HHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCC >Mature Secondary Structure MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEA CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHH IGEGELSREDIETIEKLNEEFRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKE HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHH ILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENEVEIDCGL HHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA