| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309745
Identifier: 18309745
GI number: 18309745
Start: 943121
End: 944074
Strand: Direct
Name: 18309745
Synonym: CPE0763
Alternate gene names: NA
Gene position: 943121-944074 (Clockwise)
Preceding gene: 18309742
Following gene: 18309747
Centisome position: 31.11
GC content: 25.26
Gene sequence:
>954_bases ATGAAGGGGAATAAATTAAGTGTTTCAGGAGTTATTTTAATAATAAGTTTTTTTATTTATATTGTTTATTTGGTTTCAAG CAATATTTTATTAAACTATGGTATGGAGTTTAGAGAAAGTGTTATAGAGTTTATTGCTTGGGATAAGTTTGTATTTGTAA TAATGTTGAATATATTAATTATTAGAATAATTATGAAGAGAAAAAAGATAGGAAAAGAAATGAAGTTGTTCTTTACTCTT ATATCTTTTTTTATAAGTGCTATTATAACGTTTATTTTTGTTTTAGCACCATATATTTTAATTTCAAGAGTGGAAGCTTT AGCATATAAAGAAGGAAGATTAGTAGTAGCTGCTTCTAGTGATGGATTACATAATTCAAGGATAAGTTTTTATGAACCTA TAAATTCTATTGTTATGAAAAATAGTGATATTGAGGATTTACATCATAATGCTCCTAACAATTGTTATTATTATGGAAAA TCTAACTTTTTAGAAAATCCTGATTTTGATATAAGGGAAGAATCTGATTTTAGGGATTTAAAGCCATGGAGTGCAAAGGA AAAATTTAGCCATGAAGTATTTAATTATTTAGGAAACCAAACTTATGATTTCGGGGGTATAGTGATTAAATTTGATAAAA AAGAAACCTGGGTGAAAGAAGCTTCTATAGAAAGAAATATAGTTAAGTATGATGGGGTAAATATAATAGGTGAAAATATT GAGACTATTAAAGAAAATATAAGTAAAGCGGAGAAAGATCATGATGACAGTACTATATATGAAGAATTTTTAGATGAAAA AGGTAATAGAAATGTTAGAATTGGTAGTAAGTATAGATTTAACACTAAAGATGAGTATAGCATATCTTATTATAACACGA CTTTAGTTCTTAATGATAATGGCATAGTTACTTCAGTTAAATATTTAAATAATAATTTTGAAGATGTAGATTAA
Upstream 100 bases:
>100_bases TTATATATATTTACAAATTTATATAAATAAAATAATATATTTGTAAAATATAACACTTAAGCTATATTAAGTTATTTATA TTTTTAGGGGGAGGAGTTAC
Downstream 100 bases:
>100_bases AATCTATACTTAGTAAATAAAAATTATTTAACTTATTAAAATATGGTTTATATAAAAACATAAATACAAATGAGGTTTTT TAGTAAGTTTTGATTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKGNKLSVSGVILIISFFIYIVYLVSSNILLNYGMEFRESVIEFIAWDKFVFVIMLNILIIRIIMKRKKIGKEMKLFFTL ISFFISAIITFIFVLAPYILISRVEALAYKEGRLVVAASSDGLHNSRISFYEPINSIVMKNSDIEDLHHNAPNNCYYYGK SNFLENPDFDIREESDFRDLKPWSAKEKFSHEVFNYLGNQTYDFGGIVIKFDKKETWVKEASIERNIVKYDGVNIIGENI ETIKENISKAEKDHDDSTIYEEFLDEKGNRNVRIGSKYRFNTKDEYSISYYNTTLVLNDNGIVTSVKYLNNNFEDVD
Sequences:
>Translated_317_residues MKGNKLSVSGVILIISFFIYIVYLVSSNILLNYGMEFRESVIEFIAWDKFVFVIMLNILIIRIIMKRKKIGKEMKLFFTL ISFFISAIITFIFVLAPYILISRVEALAYKEGRLVVAASSDGLHNSRISFYEPINSIVMKNSDIEDLHHNAPNNCYYYGK SNFLENPDFDIREESDFRDLKPWSAKEKFSHEVFNYLGNQTYDFGGIVIKFDKKETWVKEASIERNIVKYDGVNIIGENI ETIKENISKAEKDHDDSTIYEEFLDEKGNRNVRIGSKYRFNTKDEYSISYYNTTLVLNDNGIVTSVKYLNNNFEDVD >Mature_317_residues MKGNKLSVSGVILIISFFIYIVYLVSSNILLNYGMEFRESVIEFIAWDKFVFVIMLNILIIRIIMKRKKIGKEMKLFFTL ISFFISAIITFIFVLAPYILISRVEALAYKEGRLVVAASSDGLHNSRISFYEPINSIVMKNSDIEDLHHNAPNNCYYYGK SNFLENPDFDIREESDFRDLKPWSAKEKFSHEVFNYLGNQTYDFGGIVIKFDKKETWVKEASIERNIVKYDGVNIIGENI ETIKENISKAEKDHDDSTIYEEFLDEKGNRNVRIGSKYRFNTKDEYSISYYNTTLVLNDNGIVTSVKYLNNNFEDVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36901; Mature: 36901
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGNKLSVSGVILIISFFIYIVYLVSSNILLNYGMEFRESVIEFIAWDKFVFVIMLNILI CCCCEEEHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH IRIIMKRKKIGKEMKLFFTLISFFISAIITFIFVLAPYILISRVEALAYKEGRLVVAASS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC DGLHNSRISFYEPINSIVMKNSDIEDLHHNAPNNCYYYGKSNFLENPDFDIREESDFRDL CCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC KPWSAKEKFSHEVFNYLGNQTYDFGGIVIKFDKKETWVKEASIERNIVKYDGVNIIGENI CCCCHHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHHHCCCEEECCCEEECCCH ETIKENISKAEKDHDDSTIYEEFLDEKGNRNVRIGSKYRFNTKDEYSISYYNTTLVLNDN HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCEEECCCCCCEEEEEEEEEEEECCC GIVTSVKYLNNNFEDVD CCEEEHHHHCCCCCCCC >Mature Secondary Structure MKGNKLSVSGVILIISFFIYIVYLVSSNILLNYGMEFRESVIEFIAWDKFVFVIMLNILI CCCCEEEHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH IRIIMKRKKIGKEMKLFFTLISFFISAIITFIFVLAPYILISRVEALAYKEGRLVVAASS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC DGLHNSRISFYEPINSIVMKNSDIEDLHHNAPNNCYYYGKSNFLENPDFDIREESDFRDL CCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC KPWSAKEKFSHEVFNYLGNQTYDFGGIVIKFDKKETWVKEASIERNIVKYDGVNIIGENI CCCCHHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHHHCCCEEECCCEEECCCH ETIKENISKAEKDHDDSTIYEEFLDEKGNRNVRIGSKYRFNTKDEYSISYYNTTLVLNDN HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCEEECCCCCCEEEEEEEEEEEECCC GIVTSVKYLNNNFEDVD CCEEEHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA