| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is naoX [H]
Identifier: 18309716
GI number: 18309716
Start: 909869
End: 911569
Strand: Direct
Name: naoX [H]
Synonym: CPE0734
Alternate gene names: 18309716
Gene position: 909869-911569 (Clockwise)
Preceding gene: 18309714
Following gene: 18309717
Centisome position: 30.01
GC content: 31.98
Gene sequence:
>1701_bases ATGAGTAAAAAGATAGTTATTGTTGGAGGAGTAGCAGGTGGAGCTTCAACAGCAGCAAGACTTAGAAGATTAGATGAAAA TAATCAAATAATAATGTTTGAAAGAGGTCCTCACGTATCCTTTTCAAACTGTTGTCTACCATACTATTTAAGTGGAAAAG TTGAAAATCATGAAGATTTAGTTCTTATGACTCCTGAAAAATTTTATAGCCAATATAGAATTGATGCGAGAGTTTATACA GAAGTAGTATCAATTAATAGAAAAGCTAAAGAAGTAACAGTAAGAAATGTAGTAAGTGGACAAGAATATACTGAAAGCTA TGACAAATTAGTTCTTTCACCAGGAGCAAAGGCTATAGTACCACCAATAAAAGGAATTGAAGATGTTAATGTATTTACAG TTAGAAATGTTGTGGATATAGCAAAATTAGATTCTTTTATAAAGGATAATAATAGTAAGAACATATCAGTAATAGGTGGA GGATTTATAGGAGTTGAAGTTGCAGAGAATTTACATGAAGCTGGATATAACGTAACTTTAATAGAAGCAATGGATCAAAT AATGAAGCCATTTGATTATGATATGGTTCAAGTTTTACATAAAGAAATGTATGATAAGGGCGTAAATTTAATAGTTGGAG ATAAAGTAAGCTCTTTTGAAAGTGGAAAAGTAGTATTAGAATCAGGAAAGAAAATAAATTCAGATGCAGTTGTTATGGCT ATAGGAGTTGCACCAGAAACAGATTTAGCTAGGGAAGCTGGGTTAGAAATTGGACAAACTGGAGCAATAAAAGTTAATCA AAATTATTTAACTAATGATAAGGATATCTATGCAGTTGGAGATGCTGTGGAAGTTTATAATTCATTAACAAACTCAATAT CTAGATTACCATTAGCGGGACCCGCACAAAAACAAGCGAGAGCAGTAGCAGATCATATACATGGAAGACCATCAAGAAAT AGTGGATATATAGGTTCATCCTGTGTTCAAATATTTCATTATAATGGAGCTTCAACAGGCTTAACAGAAGGTCAAATAAA AGCTATGAATTTAAGCTTAAACTATGATGTTGTAAGGGTTATACCTCAAGACAAGGTAGGATTAATGCCAGGAAGTGAGC CATTACACTTTAAATTAATATTTGAAGTTCCAACAGGAAGAATTTTAGGAGCACAAGCAATTGGTAAAGGAAATGCAGAT AAGAGAGTTGATATAATAGCTACCTTAATAAAAATGGGTGGAACTGTAGAAGACTTAAAAGATTTAGAGCTTTGTTATGC TCCTCCTTTCGGAACAGCTAAGGATGTAGTAAATCATGCTGCATTAGTTGCATCAAATCTTTTAGAAGGAACATTTAAAC AAGTTTATGTACATGAAGTAAGGGATTTAGTTGAAAGCGGAGCATGTATAATAGACGTTAGAGAAGTAAGTGAATATGAA GCAGGACATATAAAAGGAGCCAAAAATCTTCCTTTAAGTGAAATAAGAGATAGATTAGATGAAATACCAACTGATAGACC AGTTTATTTACATTGTAGAAGTGCTCAAAGAAGTTATAATGCATGTTTAGCATTACAACATTTAGGATTTGATAACATTT ATAATGTATCAGGTGGATTCATGGGAATAAGCTTCTATGAATACTATAATGATAAAGTTCAAGATAGAGAGCCTATAGTT ACAGAATATAATTTTAATTAG
Upstream 100 bases:
>100_bases ATGATACTATCAAGTAGAGGTAATTAAATTACACACATATTAGATAAAAATTTAACAAAGAGAATTTGTTTAGATATTCA CTAAGAAAGGTGGAAATATA
Downstream 100 bases:
>100_bases AGTAAATACATGGTGTTTTAATTAATTTTAAAACACCATAGTAAAAAATAATATTATTAAAAATAAAATAGTTTGTTAAT TAACAAATTAATAGGGGGAA
Product: pyridine nucleotide-disulphide oxidoreductase family protein
Products: NA
Alternate protein names: CoA-disulfide reductase; CoADR [H]
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MSKKIVIVGGVAGGASTAARLRRLDENNQIIMFERGPHVSFSNCCLPYYLSGKVENHEDLVLMTPEKFYSQYRIDARVYT EVVSINRKAKEVTVRNVVSGQEYTESYDKLVLSPGAKAIVPPIKGIEDVNVFTVRNVVDIAKLDSFIKDNNSKNISVIGG GFIGVEVAENLHEAGYNVTLIEAMDQIMKPFDYDMVQVLHKEMYDKGVNLIVGDKVSSFESGKVVLESGKKINSDAVVMA IGVAPETDLAREAGLEIGQTGAIKVNQNYLTNDKDIYAVGDAVEVYNSLTNSISRLPLAGPAQKQARAVADHIHGRPSRN SGYIGSSCVQIFHYNGASTGLTEGQIKAMNLSLNYDVVRVIPQDKVGLMPGSEPLHFKLIFEVPTGRILGAQAIGKGNAD KRVDIIATLIKMGGTVEDLKDLELCYAPPFGTAKDVVNHAALVASNLLEGTFKQVYVHEVRDLVESGACIIDVREVSEYE AGHIKGAKNLPLSEIRDRLDEIPTDRPVYLHCRSAQRSYNACLALQHLGFDNIYNVSGGFMGISFYEYYNDKVQDREPIV TEYNFN
Sequences:
>Translated_566_residues MSKKIVIVGGVAGGASTAARLRRLDENNQIIMFERGPHVSFSNCCLPYYLSGKVENHEDLVLMTPEKFYSQYRIDARVYT EVVSINRKAKEVTVRNVVSGQEYTESYDKLVLSPGAKAIVPPIKGIEDVNVFTVRNVVDIAKLDSFIKDNNSKNISVIGG GFIGVEVAENLHEAGYNVTLIEAMDQIMKPFDYDMVQVLHKEMYDKGVNLIVGDKVSSFESGKVVLESGKKINSDAVVMA IGVAPETDLAREAGLEIGQTGAIKVNQNYLTNDKDIYAVGDAVEVYNSLTNSISRLPLAGPAQKQARAVADHIHGRPSRN SGYIGSSCVQIFHYNGASTGLTEGQIKAMNLSLNYDVVRVIPQDKVGLMPGSEPLHFKLIFEVPTGRILGAQAIGKGNAD KRVDIIATLIKMGGTVEDLKDLELCYAPPFGTAKDVVNHAALVASNLLEGTFKQVYVHEVRDLVESGACIIDVREVSEYE AGHIKGAKNLPLSEIRDRLDEIPTDRPVYLHCRSAQRSYNACLALQHLGFDNIYNVSGGFMGISFYEYYNDKVQDREPIV TEYNFN >Mature_565_residues SKKIVIVGGVAGGASTAARLRRLDENNQIIMFERGPHVSFSNCCLPYYLSGKVENHEDLVLMTPEKFYSQYRIDARVYTE VVSINRKAKEVTVRNVVSGQEYTESYDKLVLSPGAKAIVPPIKGIEDVNVFTVRNVVDIAKLDSFIKDNNSKNISVIGGG FIGVEVAENLHEAGYNVTLIEAMDQIMKPFDYDMVQVLHKEMYDKGVNLIVGDKVSSFESGKVVLESGKKINSDAVVMAI GVAPETDLAREAGLEIGQTGAIKVNQNYLTNDKDIYAVGDAVEVYNSLTNSISRLPLAGPAQKQARAVADHIHGRPSRNS GYIGSSCVQIFHYNGASTGLTEGQIKAMNLSLNYDVVRVIPQDKVGLMPGSEPLHFKLIFEVPTGRILGAQAIGKGNADK RVDIIATLIKMGGTVEDLKDLELCYAPPFGTAKDVVNHAALVASNLLEGTFKQVYVHEVRDLVESGACIIDVREVSEYEA GHIKGAKNLPLSEIRDRLDEIPTDRPVYLHCRSAQRSYNACLALQHLGFDNIYNVSGGFMGISFYEYYNDKVQDREPIVT EYNFN
Specific function: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI21389617, Length=322, Percent_Identity=28.2608695652174, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI65787454, Length=322, Percent_Identity=28.2608695652174, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI226437568, Length=322, Percent_Identity=28.2608695652174, Blast_Score=118, Evalue=2e-26, Organism=Escherichia coli, GI1789065, Length=320, Percent_Identity=28.75, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1789765, Length=327, Percent_Identity=28.1345565749235, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1788892, Length=283, Percent_Identity=26.1484098939929, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1786307, Length=329, Percent_Identity=26.7477203647416, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787352, Length=279, Percent_Identity=26.5232974910394, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI87082354, Length=386, Percent_Identity=25.6476683937824, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17559934, Length=292, Percent_Identity=28.4246575342466, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24585130, Length=291, Percent_Identity=23.0240549828179, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24639257, Length=293, Percent_Identity=23.5494880546075, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI281359715, Length=293, Percent_Identity=23.5494880546075, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI281359713, Length=293, Percent_Identity=23.5494880546075, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24639250, Length=293, Percent_Identity=23.5494880546075, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI18543267, Length=293, Percent_Identity=23.5494880546075, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24639252, Length=293, Percent_Identity=23.5494880546075, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017758 - InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.14 [H]
Molecular weight: Translated: 62170; Mature: 62038
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKIVIVGGVAGGASTAARLRRLDENNQIIMFERGPHVSFSNCCLPYYLSGKVENHEDL CCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCE VLMTPEKFYSQYRIDARVYTEVVSINRKAKEVTVRNVVSGQEYTESYDKLVLSPGAKAIV EEECCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEC PPIKGIEDVNVFTVRNVVDIAKLDSFIKDNNSKNISVIGGGFIGVEVAENLHEAGYNVTL CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCEEHHHHHHHHHHCCCCEEH IEAMDQIMKPFDYDMVQVLHKEMYDKGVNLIVGDKVSSFESGKVVLESGKKINSDAVVMA HHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEECCCEECCCEEEEE IGVAPETDLAREAGLEIGQTGAIKVNQNYLTNDKDIYAVGDAVEVYNSLTNSISRLPLAG EECCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCC PAQKQARAVADHIHGRPSRNSGYIGSSCVQIFHYNGASTGLTEGQIKAMNLSLNYDVVRV CHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCEEEEEEEEECCEEEEE IPQDKVGLMPGSEPLHFKLIFEVPTGRILGAQAIGKGNADKRVDIIATLIKMGGTVEDLK CCCCCCCCCCCCCCEEEEEEEECCCCCEECCHHCCCCCCCCHHHHHHHHHHHCCCHHHHH DLELCYAPPFGTAKDVVNHAALVASNLLEGTFKQVYVHEVRDLVESGACIIDVREVSEYE CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCC AGHIKGAKNLPLSEIRDRLDEIPTDRPVYLHCRSAQRSYNACLALQHLGFDNIYNVSGGF CCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCE MGISFYEYYNDKVQDREPIVTEYNFN EEEEHHHHHCCCCCCCCCEEEECCCC >Mature Secondary Structure SKKIVIVGGVAGGASTAARLRRLDENNQIIMFERGPHVSFSNCCLPYYLSGKVENHEDL CCEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCE VLMTPEKFYSQYRIDARVYTEVVSINRKAKEVTVRNVVSGQEYTESYDKLVLSPGAKAIV EEECCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEC PPIKGIEDVNVFTVRNVVDIAKLDSFIKDNNSKNISVIGGGFIGVEVAENLHEAGYNVTL CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCEEHHHHHHHHHHCCCCEEH IEAMDQIMKPFDYDMVQVLHKEMYDKGVNLIVGDKVSSFESGKVVLESGKKINSDAVVMA HHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEECCCEECCCEEEEE IGVAPETDLAREAGLEIGQTGAIKVNQNYLTNDKDIYAVGDAVEVYNSLTNSISRLPLAG EECCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCC PAQKQARAVADHIHGRPSRNSGYIGSSCVQIFHYNGASTGLTEGQIKAMNLSLNYDVVRV CHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCEEEEEEEEECCEEEEE IPQDKVGLMPGSEPLHFKLIFEVPTGRILGAQAIGKGNADKRVDIIATLIKMGGTVEDLK CCCCCCCCCCCCCCEEEEEEEECCCCCEECCHHCCCCCCCCHHHHHHHHHHHCCCHHHHH DLELCYAPPFGTAKDVVNHAALVASNLLEGTFKQVYVHEVRDLVESGACIIDVREVSEYE CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCC AGHIKGAKNLPLSEIRDRLDEIPTDRPVYLHCRSAQRSYNACLALQHLGFDNIYNVSGGF CCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCE MGISFYEYYNDKVQDREPIVTEYNFN EEEEHHHHHCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA