Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is ydfG [C]

Identifier: 18309710

GI number: 18309710

Start: 905664

End: 905942

Strand: Direct

Name: ydfG [C]

Synonym: CPE0728

Alternate gene names: 18309710

Gene position: 905664-905942 (Clockwise)

Preceding gene: 18309709

Following gene: 18309711

Centisome position: 29.88

GC content: 31.18

Gene sequence:

>279_bases
ATGAATAAGAAAGTTATTTTAATTACTGGAGCTAGTTCGGGAATAGGTTATTCAACTGCTAAATTATTATTAGAAGAGGG
ACATATAGTATATTGTACTGCAAGAAGAGTAGAAAACATGAGAGAACTTCAAAGGTTAGGTGGAAAGATAATATTTTTAG
ATGTTAAGGATGAAAGGGCAGTACAAAAAGTTGTAAATACTATAATTAGAATGGAATCTAGAATAGATGTGGTTTTTGCT
AACTCTGGGTGGGGCATTAGAAACTGTAAATATAGATGA

Upstream 100 bases:

>100_bases
AAAATAATTTCATTATATAAAGTAAGTAATATGGTTATTAAAGGTTATTTTTAGTGAGGTTTTAGATTTATATATTTAAT
ATTTTTAGTAGGAGGATAAA

Downstream 100 bases:

>100_bases
TGCAAAGGAAGAATTTGATGTTAATTTGTTTGGAGTAGCAAGAGTTATTAAGGCTGTAATGACCCAAATGAGGAAACAAA
AGTATGGATATATTATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Short Chain Dehydrogenase; Oxidoreductase; Short-Chain Dehydrogenase/Reductase Family Protein; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Short Chain Dehydrogenase Family Protein; Short-Chain Alcohol Dehydrogenase/Reductase; Cis-2 3-Dihydrobiphenyl-2 3-Diol Dehydrogenase; Short-Chain Type Dehydrogenase; NAD Dependent Epimerase/Dehydratase Family; Dehydrogenase; Short Chain Dehydrogenase/Reductase Estradiol

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERAVQKVVNTIIRMESRIDVVFA
NSGWGIRNCKYR

Sequences:

>Translated_92_residues
MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERAVQKVVNTIIRMESRIDVVFA
NSGWGIRNCKYR
>Mature_92_residues
MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERAVQKVVNTIIRMESRIDVVFA
NSGWGIRNCKYR

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 10442; Mature: 10442

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERA
CCCEEEEEECCCCCCCHHHHHHHEECCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCHHH
VQKVVNTIIRMESRIDVVFANSGWGIRNCKYR
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERA
CCCEEEEEECCCCCCCHHHHHHHEECCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCHHH
VQKVVNTIIRMESRIDVVFANSGWGIRNCKYR
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA