| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is ydfG [C]
Identifier: 18309710
GI number: 18309710
Start: 905664
End: 905942
Strand: Direct
Name: ydfG [C]
Synonym: CPE0728
Alternate gene names: 18309710
Gene position: 905664-905942 (Clockwise)
Preceding gene: 18309709
Following gene: 18309711
Centisome position: 29.88
GC content: 31.18
Gene sequence:
>279_bases ATGAATAAGAAAGTTATTTTAATTACTGGAGCTAGTTCGGGAATAGGTTATTCAACTGCTAAATTATTATTAGAAGAGGG ACATATAGTATATTGTACTGCAAGAAGAGTAGAAAACATGAGAGAACTTCAAAGGTTAGGTGGAAAGATAATATTTTTAG ATGTTAAGGATGAAAGGGCAGTACAAAAAGTTGTAAATACTATAATTAGAATGGAATCTAGAATAGATGTGGTTTTTGCT AACTCTGGGTGGGGCATTAGAAACTGTAAATATAGATGA
Upstream 100 bases:
>100_bases AAAATAATTTCATTATATAAAGTAAGTAATATGGTTATTAAAGGTTATTTTTAGTGAGGTTTTAGATTTATATATTTAAT ATTTTTAGTAGGAGGATAAA
Downstream 100 bases:
>100_bases TGCAAAGGAAGAATTTGATGTTAATTTGTTTGGAGTAGCAAGAGTTATTAAGGCTGTAATGACCCAAATGAGGAAACAAA AGTATGGATATATTATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Short Chain Dehydrogenase; Oxidoreductase; Short-Chain Dehydrogenase/Reductase Family Protein; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Short Chain Dehydrogenase Family Protein; Short-Chain Alcohol Dehydrogenase/Reductase; Cis-2 3-Dihydrobiphenyl-2 3-Diol Dehydrogenase; Short-Chain Type Dehydrogenase; NAD Dependent Epimerase/Dehydratase Family; Dehydrogenase; Short Chain Dehydrogenase/Reductase Estradiol
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERAVQKVVNTIIRMESRIDVVFA NSGWGIRNCKYR
Sequences:
>Translated_92_residues MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERAVQKVVNTIIRMESRIDVVFA NSGWGIRNCKYR >Mature_92_residues MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERAVQKVVNTIIRMESRIDVVFA NSGWGIRNCKYR
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 10442; Mature: 10442
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERA CCCEEEEEECCCCCCCHHHHHHHEECCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCHHH VQKVVNTIIRMESRIDVVFANSGWGIRNCKYR HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERA CCCEEEEEECCCCCCCHHHHHHHEECCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCHHH VQKVVNTIIRMESRIDVVFANSGWGIRNCKYR HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA