Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309709

Identifier: 18309709

GI number: 18309709

Start: 904693

End: 905499

Strand: Direct

Name: 18309709

Synonym: CPE0727

Alternate gene names: NA

Gene position: 904693-905499 (Clockwise)

Preceding gene: 18309708

Following gene: 18309710

Centisome position: 29.84

GC content: 29.0

Gene sequence:

>807_bases
ATGAAGCTAGCTGAAAAATTACAATTAATGAGAAAACGAGAAGGATTATCTCAAGAAGATTTAGCAGAAAAATTAGGTAT
ATCAAGACAAGCTGTTTCAAAATGGGAATCAGGTCAATCAGTACCAGATTTAAATAAGCTAATAATACTTTCTGAATTAT
ACAATGTTACAATAGATTATCTAGTTAAAGAAACTTACGAATTTGAAGGGAGCCAAGAAAAAGAAATAGGTAATACAGGG
AAACAATATGGAGAAAACTTAGGGAATAAAGAAACACAGTTGATTATTCACTTTAATAATAAATATTCTTTAGAATATGA
ATACAAGAGTAAAAAAACCATATGTGGGGTACCTGTTGTTCATATTAACTTGGGAAGAGGCTTAAAAAAGGCAAAGGGGA
TAATTGCTATAGGAAATATATCTTGTGGAGTTATATCTATAGGTTTTATTTCTCTTGGAATTTTTAGTTTGGGATTTTTA
TCAATAGGGTTAATCAGTATTGCACTTTTAGCATTAGGATTTTTACTTTCAATAGGTACTATTTCATTAGGAGTTTTTTC
AATTGGTGCAATAGCTGTAGGAAAATATTCAATAGGTGCAATTGCAATAGCATCAGATATAGCTATAGGAGATTATGCAA
AAGCTAATATAGCCATAGGAAATATAACTGAAGGATCAAATTTGATTCCATTAGGTACGTCAGGAGAAGATATAGAAGAA
TTAATTAAACATGAATATCCTAATTTAGCCCAATGGTTTATAAATAAAATTAAATTTTTTCTTGGGTGTATTAGAATAGA
AAATTAG

Upstream 100 bases:

>100_bases
GATGAATAAAGGGATGCAACTAATAGTTGACAAAAAGAAATTGTTAGTTGGTAGACCAATATATAAGAATTTTGTATAGT
TTTCCATGGAGGTGAAAAAT

Downstream 100 bases:

>100_bases
AGAACTTTTTTAAATTCATTTATTGGTTTTTTAGTTTATAGGTATAGAATTTGTTGTTATAGGAAAAATAATTTCATTAT
ATAAAGTAAGTAATATGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Xin-Antitoxin System Antitoxin Component Xre Family; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator Xre Family; Transcription Regulator; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKLAEKLQLMRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELYNVTIDYLVKETYEFEGSQEKEIGNTG
KQYGENLGNKETQLIIHFNNKYSLEYEYKSKKTICGVPVVHINLGRGLKKAKGIIAIGNISCGVISIGFISLGIFSLGFL
SIGLISIALLALGFLLSIGTISLGVFSIGAIAVGKYSIGAIAIASDIAIGDYAKANIAIGNITEGSNLIPLGTSGEDIEE
LIKHEYPNLAQWFINKIKFFLGCIRIEN

Sequences:

>Translated_268_residues
MKLAEKLQLMRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELYNVTIDYLVKETYEFEGSQEKEIGNTG
KQYGENLGNKETQLIIHFNNKYSLEYEYKSKKTICGVPVVHINLGRGLKKAKGIIAIGNISCGVISIGFISLGIFSLGFL
SIGLISIALLALGFLLSIGTISLGVFSIGAIAVGKYSIGAIAIASDIAIGDYAKANIAIGNITEGSNLIPLGTSGEDIEE
LIKHEYPNLAQWFINKIKFFLGCIRIEN
>Mature_268_residues
MKLAEKLQLMRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELYNVTIDYLVKETYEFEGSQEKEIGNTG
KQYGENLGNKETQLIIHFNNKYSLEYEYKSKKTICGVPVVHINLGRGLKKAKGIIAIGNISCGVISIGFISLGIFSLGFL
SIGLISIALLALGFLLSIGTISLGVFSIGAIAVGKYSIGAIAIASDIAIGDYAKANIAIGNITEGSNLIPLGTSGEDIEE
LIKHEYPNLAQWFINKIKFFLGCIRIEN

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29162; Mature: 29162

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAEKLQLMRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELYNVTIDY
CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LVKETYEFEGSQEKEIGNTGKQYGENLGNKETQLIIHFNNKYSLEYEYKSKKTICGVPVV
HHHHHHHCCCCCHHHHCHHHHHHHHHCCCCCEEEEEEECCEEEEEEEECCCCEEECCCEE
HINLGRGLKKAKGIIAIGNISCGVISIGFISLGIFSLGFLSIGLISIALLALGFLLSIGT
EEECCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLGVFSIGAIAVGKYSIGAIAIASDIAIGDYAKANIAIGNITEGSNLIPLGTSGEDIEE
HHHHHHHHHHHEECCCCCCEEEEECCCEECCCCCCEEEEECCCCCCCEEECCCCCHHHHH
LIKHEYPNLAQWFINKIKFFLGCIRIEN
HHHCCCCCHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKLAEKLQLMRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELYNVTIDY
CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LVKETYEFEGSQEKEIGNTGKQYGENLGNKETQLIIHFNNKYSLEYEYKSKKTICGVPVV
HHHHHHHCCCCCHHHHCHHHHHHHHHCCCCCEEEEEEECCEEEEEEEECCCCEEECCCEE
HINLGRGLKKAKGIIAIGNISCGVISIGFISLGIFSLGFLSIGLISIALLALGFLLSIGT
EEECCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLGVFSIGAIAVGKYSIGAIAIASDIAIGDYAKANIAIGNITEGSNLIPLGTSGEDIEE
HHHHHHHHHHHEECCCCCCEEEEECCCEECCCCCCEEEEECCCCCCCEEECCCCCHHHHH
LIKHEYPNLAQWFINKIKFFLGCIRIEN
HHHCCCCCHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA