| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is aroK [H]
Identifier: 18309683
GI number: 18309683
Start: 876144
End: 876659
Strand: Direct
Name: aroK [H]
Synonym: CPE0701
Alternate gene names: 18309683
Gene position: 876144-876659 (Clockwise)
Preceding gene: 18309682
Following gene: 18309684
Centisome position: 28.9
GC content: 30.43
Gene sequence:
>516_bases ATGAAAAAAAGAGGAGTACTTTTAATTGGAATGCCTGGAGCAGGAAAAACAACCATAGGAAGAGAGCTTTCAAAGGTATT AAAAATGAATTTTTTAGACATGGATGAATTCATAGAAAGAAGTACAGGAAAAGAAATAAAAGAACTTTTTGCTCAGGGAG AAGAGGTTTTTAGAGATTTAGAAAGTAAAAGTTGTGAACTTTTATCAACCTTAAAAAATGTGGTTATATCTTCTGGTGGC GGAATAGTTACAAGAGAAGAAAATATGGGGAATTTTAAGGAGTTTATAACTGTTTTTATAAACAGACCTTTAGATTTAAT TATGGAAGATATAGACACAGAAGGAAGACCTCTTTTATGGGATGGCAAAGAAAGACTTACTAATTTATATAGAGATAGAA TTGATTTATATAAAAAGCATAGTGATATAGAAATTATAAATGATGGTACTACTAAAGAGGCTATTAGGGAAATAGTCGAA GCTATTTCTGAGTTGGGTTTACAAGAGAAAGAATAG
Upstream 100 bases:
>100_bases ATTATAAATGATTACTGATTTAAAATAGGAATAAAAACTAAAATTAATTTTAAAAGTTTAAATAATATTGTTGGGTAAAA TACAAAAAGGGGATTAGGAT
Downstream 100 bases:
>100_bases TTTTTTAATAGATAAGAATTTTTTCAGCGATTTAAGATTATAAATTATAATCTTTCAAGAAGTTATTATTAAATAAACTT GTGAAATTTTCTATGAAAAA
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDLESKSCELLSTLKNVVISSGG GIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLWDGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVE AISELGLQEKE
Sequences:
>Translated_171_residues MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDLESKSCELLSTLKNVVISSGG GIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLWDGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVE AISELGLQEKE >Mature_171_residues MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDLESKSCELLSTLKNVVISSGG GIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLWDGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVE AISELGLQEKE
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19484; Mature: 19484
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDL CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH ESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLW HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEE DGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVEAISELGLQEKE CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDL CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH ESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLW HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEE DGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVEAISELGLQEKE CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA