Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is aroK [H]

Identifier: 18309683

GI number: 18309683

Start: 876144

End: 876659

Strand: Direct

Name: aroK [H]

Synonym: CPE0701

Alternate gene names: 18309683

Gene position: 876144-876659 (Clockwise)

Preceding gene: 18309682

Following gene: 18309684

Centisome position: 28.9

GC content: 30.43

Gene sequence:

>516_bases
ATGAAAAAAAGAGGAGTACTTTTAATTGGAATGCCTGGAGCAGGAAAAACAACCATAGGAAGAGAGCTTTCAAAGGTATT
AAAAATGAATTTTTTAGACATGGATGAATTCATAGAAAGAAGTACAGGAAAAGAAATAAAAGAACTTTTTGCTCAGGGAG
AAGAGGTTTTTAGAGATTTAGAAAGTAAAAGTTGTGAACTTTTATCAACCTTAAAAAATGTGGTTATATCTTCTGGTGGC
GGAATAGTTACAAGAGAAGAAAATATGGGGAATTTTAAGGAGTTTATAACTGTTTTTATAAACAGACCTTTAGATTTAAT
TATGGAAGATATAGACACAGAAGGAAGACCTCTTTTATGGGATGGCAAAGAAAGACTTACTAATTTATATAGAGATAGAA
TTGATTTATATAAAAAGCATAGTGATATAGAAATTATAAATGATGGTACTACTAAAGAGGCTATTAGGGAAATAGTCGAA
GCTATTTCTGAGTTGGGTTTACAAGAGAAAGAATAG

Upstream 100 bases:

>100_bases
ATTATAAATGATTACTGATTTAAAATAGGAATAAAAACTAAAATTAATTTTAAAAGTTTAAATAATATTGTTGGGTAAAA
TACAAAAAGGGGATTAGGAT

Downstream 100 bases:

>100_bases
TTTTTTAATAGATAAGAATTTTTTCAGCGATTTAAGATTATAAATTATAATCTTTCAAGAAGTTATTATTAAATAAACTT
GTGAAATTTTCTATGAAAAA

Product: shikimate kinase

Products: NA

Alternate protein names: SK [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDLESKSCELLSTLKNVVISSGG
GIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLWDGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVE
AISELGLQEKE

Sequences:

>Translated_171_residues
MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDLESKSCELLSTLKNVVISSGG
GIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLWDGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVE
AISELGLQEKE
>Mature_171_residues
MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDLESKSCELLSTLKNVVISSGG
GIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLWDGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVE
AISELGLQEKE

Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]

COG id: COG0703

COG function: function code E; Shikimate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the shikimate kinase family [H]

Homologues:

Organism=Escherichia coli, GI87082255, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000623 [H]

Pfam domain/function: PF01202 SKI [H]

EC number: =2.7.1.71 [H]

Molecular weight: Translated: 19484; Mature: 19484

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDL
CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
ESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLW
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEE
DGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVEAISELGLQEKE
CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERSTGKEIKELFAQGEEVFRDL
CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
ESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDIDTEGRPLLW
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEE
DGKERLTNLYRDRIDLYKKHSDIEIINDGTTKEAIREIVEAISELGLQEKE
CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA