Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is aroF [H]

Identifier: 18309676

GI number: 18309676

Start: 868969

End: 869982

Strand: Direct

Name: aroF [H]

Synonym: CPE0694

Alternate gene names: 18309676

Gene position: 868969-869982 (Clockwise)

Preceding gene: 18309675

Following gene: 18309677

Centisome position: 28.67

GC content: 34.71

Gene sequence:

>1014_bases
ATGATAGTTATATTAAAACCAGGAACAAAGGAAGAGGAGATTTTAAAATTGATAAAAAAGATAGAATCACTTGGAGTTGA
GACTCAAAGAATTTCTGGAAGTGAAATGTGTGTAATTGGTTTAGTTGGAGATACAAGCAAAATAGATCCTGCTAAAGTAG
AAGCAAACAAAAATGTAGAGAGAATAATGCCTGTTCAAGAGCCCTTTAAAAAGGCAAATAGATTATTCCATCCAGATAAC
TCTATAATTGATGTCTTAGGAAATAAAATTGGTGATAAGAAAATAGCATTAATAGCTGGCCCTTGTTCCGTAGAGAGTGA
GGAACAAATAACTGAAATAGCCAAAGAAGTTAAGGCATTAGGGGCAAGTTTCTTAAGAGGTGGTGCATTTAAACCAAGAA
CTTCACCATACAGTTTCCAAGGGTTAGAACTTGAAGGGTTAGAGCTTCTAAAGAAGGCTAAGGAAAAAACAGGTCTTCCT
ATAGTTACGGAAATAATGTCAACTAGTATGATAGAAAAGTTTATTGAAGAGGTTGATGTTATTCAAGTTGGAGCAAGAAA
TATGCAAAACTTTGATCTTTTAAAAGAGCTTGGAAAGACAAAAAAACCTATTCTTTTAAAAAGAGGATTGTCAGCTACAA
TAGAGGAATTAATAATGTCAGCAGAGTACATAATGGCCGGTGGAAATGAAAATGTAATTCTTTGTGAAAGAGGAATTAGA
ACCTTTGAAACTTATACAAGAAATACCTTAGACTTAAGTGCAATACCTGCTATTAAAAAACTAAGCCATTTACCAGTAAT
TGTTGATCCAAGCCATGCAGCAGGAAAATCATGGATGGTAGAACCTTTATCAAAAGCAGCCATAGCTGTAGGTGCAGATG
GATTAATAATAGAAGTACATAATGACCCTGCTAATGCCTTATGTGATGGTCAACAGTCAATTAAACCAGAAGAGTACGGC
AAGCTTTTAGACGATTTAAGAGCTATCGCAAAGGCTGTTGGTAGAGAGTTATAG

Upstream 100 bases:

>100_bases
AGTGGGTTCTATTTTTTTGCAATAGTATAATTTAAACAGTTTAATTTTACATTTAGACTATTTTAGATAAAAAGGTTAAA
ATAAAAAAGGAGGGCGAATT

Downstream 100 bases:

>100_bases
AATATTATTTAATTTAGTGGGAGTGTTTAAACTCCCATTAAATTTATACTTAAATAGAAATAACATAATAAAATTAAAGG
GTTTGGAGTGATAAAAATGA

Product: 3-deoxy-7-phosphoheptulonate synthase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIVILKPGTKEEEILKLIKKIESLGVETQRISGSEMCVIGLVGDTSKIDPAKVEANKNVERIMPVQEPFKKANRLFHPDN
SIIDVLGNKIGDKKIALIAGPCSVESEEQITEIAKEVKALGASFLRGGAFKPRTSPYSFQGLELEGLELLKKAKEKTGLP
IVTEIMSTSMIEKFIEEVDVIQVGARNMQNFDLLKELGKTKKPILLKRGLSATIEELIMSAEYIMAGGNENVILCERGIR
TFETYTRNTLDLSAIPAIKKLSHLPVIVDPSHAAGKSWMVEPLSKAAIAVGADGLIIEVHNDPANALCDGQQSIKPEEYG
KLLDDLRAIAKAVGREL

Sequences:

>Translated_337_residues
MIVILKPGTKEEEILKLIKKIESLGVETQRISGSEMCVIGLVGDTSKIDPAKVEANKNVERIMPVQEPFKKANRLFHPDN
SIIDVLGNKIGDKKIALIAGPCSVESEEQITEIAKEVKALGASFLRGGAFKPRTSPYSFQGLELEGLELLKKAKEKTGLP
IVTEIMSTSMIEKFIEEVDVIQVGARNMQNFDLLKELGKTKKPILLKRGLSATIEELIMSAEYIMAGGNENVILCERGIR
TFETYTRNTLDLSAIPAIKKLSHLPVIVDPSHAAGKSWMVEPLSKAAIAVGADGLIIEVHNDPANALCDGQQSIKPEEYG
KLLDDLRAIAKAVGREL
>Mature_337_residues
MIVILKPGTKEEEILKLIKKIESLGVETQRISGSEMCVIGLVGDTSKIDPAKVEANKNVERIMPVQEPFKKANRLFHPDN
SIIDVLGNKIGDKKIALIAGPCSVESEEQITEIAKEVKALGASFLRGGAFKPRTSPYSFQGLELEGLELLKKAKEKTGLP
IVTEIMSTSMIEKFIEEVDVIQVGARNMQNFDLLKELGKTKKPILLKRGLSATIEELIMSAEYIMAGGNENVILCERGIR
TFETYTRNTLDLSAIPAIKKLSHLPVIVDPSHAAGKSWMVEPLSKAAIAVGADGLIIEVHNDPANALCDGQQSIKPEEYG
KLLDDLRAIAKAVGREL

Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]

COG id: COG2876

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I DAHP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1787466, Length=268, Percent_Identity=29.4776119402985, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006218
- InterPro:   IPR006268 [H]

Pfam domain/function: PF00793 DAHP_synth_1 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 36792; Mature: 36792

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVILKPGTKEEEILKLIKKIESLGVETQRISGSEMCVIGLVGDTSKIDPAKVEANKNVE
CEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCHH
RIMPVQEPFKKANRLFHPDNSIIDVLGNKIGDKKIALIAGPCSVESEEQITEIAKEVKAL
HHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
GASFLRGGAFKPRTSPYSFQGLELEGLELLKKAKEKTGLPIVTEIMSTSMIEKFIEEVDV
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IQVGARNMQNFDLLKELGKTKKPILLKRGLSATIEELIMSAEYIMAGGNENVILCERGIR
HHHCCCCCCHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHEECCCCCEEEECCCCH
TFETYTRNTLDLSAIPAIKKLSHLPVIVDPSHAAGKSWMVEPLSKAAIAVGADGLIIEVH
HHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHEEECCCEEEEEEC
NDPANALCDGQQSIKPEEYGKLLDDLRAIAKAVGREL
CCCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIVILKPGTKEEEILKLIKKIESLGVETQRISGSEMCVIGLVGDTSKIDPAKVEANKNVE
CEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCHH
RIMPVQEPFKKANRLFHPDNSIIDVLGNKIGDKKIALIAGPCSVESEEQITEIAKEVKAL
HHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
GASFLRGGAFKPRTSPYSFQGLELEGLELLKKAKEKTGLPIVTEIMSTSMIEKFIEEVDV
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IQVGARNMQNFDLLKELGKTKKPILLKRGLSATIEELIMSAEYIMAGGNENVILCERGIR
HHHCCCCCCHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHEECCCCCEEEECCCCH
TFETYTRNTLDLSAIPAIKKLSHLPVIVDPSHAAGKSWMVEPLSKAAIAVGADGLIIEVH
HHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHEEECCCEEEEEEC
NDPANALCDGQQSIKPEEYGKLLDDLRAIAKAVGREL
CCCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571; 12743122 [H]