| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is tal [H]
Identifier: 18309674
GI number: 18309674
Start: 862390
End: 863037
Strand: Direct
Name: tal [H]
Synonym: CPE0692
Alternate gene names: 18309674
Gene position: 862390-863037 (Clockwise)
Preceding gene: 18309671
Following gene: 18309675
Centisome position: 28.45
GC content: 31.79
Gene sequence:
>648_bases ATGAAAATATTTATCGATACTGCCAATGTAGAAGAAATAAGAAAAGCTAGTAAATTAGGAGTTTTAGCTGGAGTAACAAC TAACCCTTCATTAATAGCAAAAGAAGGCAGAGATATTAAAGAAGTAATTGAAGAAATATGTAGCATAGTAGATGGACCAA TAAGTGCTGAAGTTATGGCTTTAGAGTGCGACGAAATGGTTAGAGAAGGAAGAGAATTAGCTAAAATACATAAAAACATA GTTATAAAAATACCTATGTGTGAAGAAGGTTTAAAAGCTGTAAAAGTATTAGCTAGTGAAGGAATAAGAACAAATGTTAC TTTAATCTTCTCACCATTACAAGCTTTATTAGCAGCTAGAGCTGGTGCATCATTCGTAAGTCCATTCTTAGGAAGACTTG ATGATATAGGAAATCCAGGAATTGAAATTGTAACTCAAATCGCTGAAATGTTTGCTTTACATGGAATAGACACTGAAATA ATATCTGCAAGTGTTAGAAACCCAATGCATGTTTTAGATTCAGCTATGGCAGGATCACACATTGCAACAATTCCTTATAA TGTTATACTTCAAATGGTAAAACATCCTTTAACTGATGCTGGTATGAAAAAATTCATTGAAGATTATAACAAAGCTTTCA ATAAATAA
Upstream 100 bases:
>100_bases AATTCTTTTTGTAATGTTAATATCTATCTGTGGAAACGATTAATAGAAAAGTATGGAATTCAAATTAATATTTTTAAAGT AATGAAAAGGAGATTATGAA
Downstream 100 bases:
>100_bases TATAATCTGCATTTACAATATAAATTAATACATTAAATTATATTTATAAAAGAATATATTTTACTTATAGTCAACAATTA ACCCTTAAAAGAACTATCTA
Product: putative translaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMALECDEMVREGRELAKIHKNI VIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAARAGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEI ISASVRNPMHVLDSAMAGSHIATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK
Sequences:
>Translated_215_residues MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMALECDEMVREGRELAKIHKNI VIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAARAGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEI ISASVRNPMHVLDSAMAGSHIATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK >Mature_215_residues MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMALECDEMVREGRELAKIHKNI VIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAARAGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEI ISASVRNPMHVLDSAMAGSHIATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=174, Percent_Identity=30.4597701149425, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI87081788, Length=217, Percent_Identity=35.9447004608295, Blast_Score=156, Evalue=8e-40, Organism=Escherichia coli, GI1790382, Length=216, Percent_Identity=37.037037037037, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI1786189, Length=163, Percent_Identity=31.2883435582822, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788807, Length=171, Percent_Identity=29.8245614035088, Blast_Score=75, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25153750, Length=173, Percent_Identity=29.4797687861272, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321480, Length=226, Percent_Identity=29.2035398230088, Blast_Score=77, Evalue=1e-15, Organism=Drosophila melanogaster, GI45549185, Length=164, Percent_Identity=31.0975609756098, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 23352; Mature: 23352
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMA CEEEEECCCHHHHHHHHHHHHEECCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH LECDEMVREGRELAKIHKNIVIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAAR HHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEIISASVRNPMHVLDSAMAGSH CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCC IATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMA CEEEEECCCHHHHHHHHHHHHEECCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH LECDEMVREGRELAKIHKNIVIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAAR HHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEIISASVRNPMHVLDSAMAGSH CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCC IATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA