| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is 18309633
Identifier: 18309633
GI number: 18309633
Start: 813713
End: 814126
Strand: Direct
Name: 18309633
Synonym: CPE0651
Alternate gene names: NA
Gene position: 813713-814126 (Clockwise)
Preceding gene: 18309632
Following gene: 18309634
Centisome position: 26.84
GC content: 25.36
Gene sequence:
>414_bases ATGATTCAATTATTCTTTAACCAAAGAGGCGCTGGAAAGAGCAAAAATTTAGTTAAACTAGCTAATGAAGAAATTGAAAA GTCTAAAGGAAGTATTATTTTTATTGATAATGATAATAAAAGAATGCTTCAGTTAAATAAAAAGGTTAGACTTATACCTA TGGACAATTATTGTGTAAAGAGTTATGATCAATTTTATGGATTTTTACAAGGGATAATTTCTAGAGATTATGATGTAGAA AGTATATATATTGATAGCATAGCAAATATTTTGGATGATATAAAATTAGAGGATTTAGAAAATTATTTGAAAAAAATAGA ACTTATGAGCAGAGAACTTAATGTAAACGTATTTGTAACTATTCATGGAGATGTGAAAATAATGCCTGAAAATATCAAGA AATATGTGGCTTAA
Upstream 100 bases:
>100_bases TAATAAATATAGAACAATAGGTTAATATTTTGAGGGTATTAGGAATATTATATATAAAGTAAGTTTTTACCTGATAAAAT ATTATTAAGGGGTGGTAAAG
Downstream 100 bases:
>100_bases GCTTTAGCTAGTTTAGAAAATAAATTGTTTTATATAGATTTATATAGTATTTATGATATTTAATACTATGGGTATAATAA GAACTATAATTAAAAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MIQLFFNQRGAGKSKNLVKLANEEIEKSKGSIIFIDNDNKRMLQLNKKVRLIPMDNYCVKSYDQFYGFLQGIISRDYDVE SIYIDSIANILDDIKLEDLENYLKKIELMSRELNVNVFVTIHGDVKIMPENIKKYVA
Sequences:
>Translated_137_residues MIQLFFNQRGAGKSKNLVKLANEEIEKSKGSIIFIDNDNKRMLQLNKKVRLIPMDNYCVKSYDQFYGFLQGIISRDYDVE SIYIDSIANILDDIKLEDLENYLKKIELMSRELNVNVFVTIHGDVKIMPENIKKYVA >Mature_137_residues MIQLFFNQRGAGKSKNLVKLANEEIEKSKGSIIFIDNDNKRMLQLNKKVRLIPMDNYCVKSYDQFYGFLQGIISRDYDVE SIYIDSIANILDDIKLEDLENYLKKIELMSRELNVNVFVTIHGDVKIMPENIKKYVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15987; Mature: 15987
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLFFNQRGAGKSKNLVKLANEEIEKSKGSIIFIDNDNKRMLQLNKKVRLIPMDNYCVK CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCEEEEECCCHHHH SYDQFYGFLQGIISRDYDVESIYIDSIANILDDIKLEDLENYLKKIELMSRELNVNVFVT HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEE IHGDVKIMPENIKKYVA ECCCEEECCHHHHHHCC >Mature Secondary Structure MIQLFFNQRGAGKSKNLVKLANEEIEKSKGSIIFIDNDNKRMLQLNKKVRLIPMDNYCVK CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCEEEEECCCHHHH SYDQFYGFLQGIISRDYDVESIYIDSIANILDDIKLEDLENYLKKIELMSRELNVNVFVT HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEE IHGDVKIMPENIKKYVA ECCCEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA